Please provide a reproducible example and test it

[gdevenyi]

Please get a brand new empty Linux install and develop/test the steps needed to get from that state to running the code and reproducing the outputs.

The current state of the README it is not possible to do this.

[karllandheer]

Yes, or please provide a working Docker image?

[lab-smile]

You can click the Release button for our recent release with the pretrained model.

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______________________________ Ruogu Fang, Ph.D. | Associate Professor | Pruitt Family Endowed Fellow University of Florida | J. Crayton Pruitt Family Department of Biomedical Engineering Herbert Wertheim College of Engineering J287 Biomedical Science Building 1275 Center Dr. | Gainesville, FL 32611 •(352) 294-1375 (will forward to cell) ***@***.*** https://lab-smile.github.io<https://lab-smile.github.io/index.html>

________________________________ From: karllandheer ***@***.***> Sent: Monday, March 4, 2024 1:53 PM To: lab-smile/GRACE ***@***.***> Cc: Subscribed ***@***.***> Subject: Re: [lab-smile/GRACE] Please provide a reproducible example and test it (Issue #7) [External Email] Yes, or please provide a working Docker image? — Reply to this email directly, view it on GitHub<#7 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AP25R4PBTJRNTYA7QNJD5ILYWS7LDAVCNFSM6AAAAABDKOO6LSVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTSNZXGI2DMNBZGA>. You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[karllandheer]

Hello, I see that and thank you for making it available. From the instructions given I have no idea how to actually run the available software. Here's a git repo on similar work (different structures but similar use case) that gives excellent documentation and working examples:

https://github.com/spinalcordtoolbox/spinalcordtoolbox

[lab-smile]

Thank you for your suggestion. We will work on improving the documentation. I cc first author too.

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______________________________ Ruogu Fang, Ph.D. | Associate Professor | Pruitt Family Endowed Fellow University of Florida | J. Crayton Pruitt Family Department of Biomedical Engineering Herbert Wertheim College of Engineering J287 Biomedical Science Building 1275 Center Dr. | Gainesville, FL 32611 •(352) 294-1375 (will forward to cell) ***@***.*** https://lab-smile.github.io<https://lab-smile.github.io/index.html>

________________________________ From: karllandheer ***@***.***> Sent: Monday, March 4, 2024 1:59 PM To: lab-smile/GRACE ***@***.***> Cc: Fang,Ruogu ***@***.***>; Comment ***@***.***> Subject: Re: [lab-smile/GRACE] Please provide a reproducible example and test it (Issue #7) [External Email] Hello, I see that and thank you for making it available. From the instructions given I have no idea how to actually run the available software. Here's a git repo on similar work (different structures but similar use case) that gives excellent documentation and working examples: https://github.com/spinalcordtoolbox/spinalcordtoolbox — Reply to this email directly, view it on GitHub<#7 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AP25R4JOFVPDBVG4ECOIUVTYWTAA5AVCNFSM6AAAAABDKOO6LSVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTSNZXGI2TOMJRGQ>. You are receiving this because you commented.Message ID: ***@***.***>