Skip to content

Comparing inferred to true data #1

@Jojo6297

Description

@Jojo6297

Dear author,

We are trying to normalize our microbiome abundance data using your normalization technique. Code is very helpful however we are failing with comparing the normalization results (fractional data, close to 1) to our original data (absolute data, up to 10e6). How can we do that?
Besides, the number of phyla in our data set is much smaller than the number of components in your simulated example. Does the method work properly on such small systems (27 phyla/components)?

Thank you very much!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions