Trouble finding index

[matthewangel]

EM-seq/main.nf

Line 50 in a6d15da

if (! file("${params.genome}.bwt").exists()) {

Should this be ${params.genome}.bwameth.c2t.bwt? I'm not sure how this will ever find the correct index since there will never be a ${params.genome}.bwt.

[aerijman]

Good catch! May be we should use a regex, because customers might want to run it systematically, without having to generate the index every time.