Hello, I am trying differential accessibility with an ArchR project:
DE = run_de(archr_obj, input_type='scATAC',replicate_col="Sample",
cell_type_col="cell_type",label_col="label")
Error in check_inputs(input = input, meta = meta, replicate_col = replicate_col, : input must be Seurat, monocle, sparse matrix, numeric matrix, or numeric data frame
Hello, I am trying differential accessibility with an ArchR project:
Error in check_inputs(input = input, meta = meta, replicate_col = replicate_col, : input must be Seurat, monocle, sparse matrix, numeric matrix, or numeric data frame