Adding an opportunity to select the aligner out of: - minimap2 and single-end data https://github.com/open2c/distiller-nf/pull/177 - requires mapping with parse2 instead of parse - bwa mem2 which is a fast optimized bwa mem - bwa aln optimized for single end https://github.com/open2c/distiller-nf/pull/171/files Pros: - flexibility for multiple types of data Cons: - reduced readability - more code and params
Adding an opportunity to select the aligner out of:
Pros:
Cons: