From 3ea11ebdd943c881f36d0d60ac063314b8272e07 Mon Sep 17 00:00:00 2001 From: Ilya Flyamer Date: Fri, 12 Feb 2021 10:12:26 +0000 Subject: [PATCH] Fix zoomify with no balancing I think the cooler arguments changed at some point, and there is no `--no-balance` argument anymore. I don't speak groovy, this tiny change fixed it for me, maybe it's no the best way? --- distiller.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/distiller.nf b/distiller.nf index 265303d..3d5d002 100644 --- a/distiller.nf +++ b/distiller.nf @@ -675,7 +675,7 @@ process merge_zoom_library_group_coolers{ def balance_options = params['bin'].get('balance_options','') balance_options = ( balance_options ? "--balance-args \"${balance_options}\"": "") // balancing flag if it's requested - def balance_flag = ( params['bin'].get('balance','false').toBoolean() ? "--balance ${balance_options}" : "--no-balance" ) + def balance_flag = ( params['bin'].get('balance','false').toBoolean() ? "--balance ${balance_options}" : "" ) def merge_command = "" if( isSingleFile(coolers))