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@Waltham-Data-Science Waltham-Data-Science

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    20 repositories

    • DID-schema

      Public
      Schema for DID documents (the underlying structure of NDI documents)
      TypeScript
      •0•0•5•4•Updated May 23, 2026May 23, 2026

    • ndi-cloud-app

      Public
      Unified NDI Cloud monorepo (marketing + data browser). Next.js 15 App Router. Replaces ndi-web-app-wds + ndi-data-browser-v2 frontend.
      TypeScript
      •0•0•6•1•Updated May 22, 2026May 22, 2026

    • ndi-data-browser-v2

      Public
      NDI Data Browser v2 — cloud-first neuroscience data explorer (FastAPI + React)
      Python
      •
      MIT License
      •0•0•2•2•Updated May 19, 2026May 19, 2026

    • NDI-python

      Public
      Python implementation of the Neuroscience Data Interface (NDI)
      Python
      •
      Other
      •0•0•0•0•Updated May 12, 2026May 12, 2026

    • nansen-pulakat

      Public
      MATLAB
      •
      Other
      •0•0•1•1•Updated May 6, 2026May 6, 2026

    • ndi-ontology-matlab

      Public
      Tools for ontology term lookups
      MATLAB
      •0•0•1•0•Updated Apr 28, 2026Apr 28, 2026

    • empty-ontology

      Public
      Makefile
      •
      Creative Commons Attribution 4.0 International
      •0•1•1•0•Updated Apr 4, 2026Apr 4, 2026

    • Brain-Observatory-Toolbox

      Public
      A MATLAB toolbox for interacting with the Allen Brain Observatory
      MATLAB
      •
      BSD 2-Clause "Simplified" License
      •3•22•39•1•Updated Mar 30, 2026Mar 30, 2026

    • file-passing

      Public
      File passing for LLMs
      0•0•0•0•Updated Mar 20, 2026Mar 20, 2026

    • NDI-compress-matlabp

      Public
      NDI-compress public library
      Other
      •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

    • GeneExt

      Public
      GeneExt - Gene extension for improved scRNA-seq data counting
      Python
      •
      GNU General Public License v3.0
      •5•0•0•0•Updated Feb 13, 2026Feb 13, 2026

    • NDI-compress-python

      Public
      NDI compression / decompression library for python
      Python
      •0•0•0•0•Updated Feb 5, 2026Feb 5, 2026

    • NDI-Matlab-for-Claude

      Public
      NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyses
      HTML
      •
      Other
      •10•0•0•0•Updated Feb 3, 2026Feb 3, 2026

    • guiser

      Public
      Serialized Graphical User Interface for maximum cross-platform portability
      MATLAB
      •
      Other
      •0•2•0•0•Updated Jul 10, 2025Jul 10, 2025

    • .github

      Public
      Waltham Data Science organization on GitHub
      0•0•0•0•Updated May 18, 2025May 18, 2025

    • cell-ontology

      Public
      An ontology of cell types
      Makefile
      •
      Creative Commons Attribution 4.0 International
      •60•0•0•0•Updated Mar 26, 2025Mar 26, 2025

    • hed-matlab

      Public
      HED MATLAB supporting tools
      MATLAB
      •
      MIT License
      •4•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • uberon

      Public
      An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
      Emacs Lisp
      •
      Other
      •41•0•0•0•Updated Dec 18, 2024Dec 18, 2024

    • MATLAB-Community-Toolboxes-extras

      Public
      Extra files or code for some Matlab-Community-Toolboxes
      0•0•0•0•Updated May 5, 2024May 5, 2024

    • EXTRACT-public

      Public
      EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time series from both one-photon…
      MATLAB
      •
      MIT License
      •24•0•0•0•Updated Nov 9, 2023Nov 9, 2023
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