ossm-models/examples/sample_fpn.xml at main · ossm-team/ossm-models · GitHub

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<?xml version="1.0" encoding="UTF-8"?>
<model xmlns="https://ossm.dev/sms/0.5"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="https://ossm.dev/sms/0.5 ../SMS.xsd">

    <metadata>
        <name>FPN model</name>
        <version>0.1</version>
        <date>2025-05-25</date>
        <license>cc-by-4.0</license>
        <author>ossm-team</author>
        <keyword>frontoparietal</keyword>
        <keyword>cerebellum</keyword>
    </metadata>

    <species name="homo sapiens" ncbi_taxid="9606"/>
    <time_base dt_ms="1"/>

    <modules>
        <module id="ppc" dt_ms="5">
            <io>
                <port id="ppc_vis_in" name="vis_in" dir="in" dtype="float32">
                    <shape spec="b,h,w,c">
                        <dim name="h" size="64"/>
                        <dim name="w" size="64"/>
                        <dim name="c" size="1"/>
                    </shape>
                </port>
                <port id="ppc_state_out" name="state_out" dir="out" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="128"/>
                    </shape>
                </port>
            </io>

            <region id="BA7" atlas="Brodmann" />
        </module>

        <module id="pfc" dt_ms="5">
            <io>
                <port id="pfc_vis_in" name="vis_in" dir="in" dtype="float32">
                    <shape spec="b,h,w,c">
                        <dim name="h" size="64"/>
                        <dim name="w" size="64"/>
                        <dim name="c" size="1"/>
                    </shape>
                </port>
                <port id="pfc_ctx_in" name="ctx_in" dir="in" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="128"/>
                    </shape>
                </port>
                <port id="pfc_control_out" name="control_out" dir="out" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="16"/>
                    </shape>
                </port>
            </io>

            <region id="BA8" atlas="Brodmann" />
        </module>

        <module id="m1" dt_ms="2">
            <io>
                <port id="m1_in" name="policy_in" dir="in" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="16"/>
                    </shape>
                </port>
                <port id="m1_motor_out" name="motor_out" dir="out" dtype="float32">
                    <shape spec="b,j">
                        <dim name="j" size="7"/>
                    </shape>
                </port>
            </io>

            <region id="BA4" atlas="Brodmann" />
        </module>

        <module id="cbl" dt_ms="1">
            <species name="macaque" ncbi_taxid="9539"/>

            <io>
                <port id="cbl_copy_in" name="cortical_copy_in" dir="in" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="16"/>
                    </shape>
                </port>

                <port id="cbl_err_in" name="error_in" dir="in" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="128"/>
                    </shape>
                </port>

                <port id="cbl_adj_out" name="adjustment_out" dir="out" dtype="float32">
                    <shape spec="b,f">
                        <dim name="f" size="16"/>
                    </shape>
                </port>
            </io>
        </module>

        <sensor id="vision">
            <io>
                <port id="vision_out" dir="in" dtype="float32" name="vision_out">
                    <shape spec="b,h,w,c">
                        <dim name="h" size="64"/>
                        <dim name="w" size="64"/>
                        <dim name="c" size="1"/>
                    </shape>
                </port>
            </io>

            <organ id="eye" />
        </sensor>

        <actuator id="arm">
            <io>
                <port id="arm_in" dir="out" dtype="float32" name="arm_in">
                    <shape spec="b,j">
                        <dim name="j" size="7"/>
                    </shape>
                </port>
            </io>

            <bodypart id="arm_right" />
        </actuator>
    </modules>

    <port_groups>
        <port_group id="vision_input">
            <member ref="ppc_vis_in"/>
            <member ref="pfc_vis_in"/>
        </port_group>
    </port_groups>

    <connections>
        <connection from="ppc_state_out" to="pfc_ctx_in"/>
        <connection from="pfc_control_out" to="cbl_copy_in"/>
        <connection from="ppc_state_out" to="cbl_err_in"/>
        <connection from="pfc_control_out" to="m1_in"/>
        <connection from="cbl_adj_out" to="m1_in"/>

        <connection from="m1_motor_out" to="arm_in"/>
        <connection from="vision_out" to="ppc_vis_in"/>
    </connections>

    <observables>
        <observable id="obs_pfc" source="pfc_control_out"/>
        <observable id="obs_cbl" source="cbl_adj_out"/>
        <observable id="obs_m1" source="m1_motor_out"/>
    </observables>

</model>