Hello!
I installed EukRep following the conda instructions in the README, but while working, EukRep returns several numpy warnings about nomenclature changes with newer versions (numpy >= 1.20) that are installed by default now.
While you can silence them, I updated the conda command to be more strict with versions required. Also, the version in the release section in this github repo is marked as 0.6.6, but the one under bioconda is 0.6.7.
conda create -y -n eukrep-0.6.7 python=3.7 "numpy<1.20" "scikit-learn==0.19.2" "eukrep==0.6.7" -c conda-forge -c bioconda
I hope this is useful for some other people out there.
Hello!
I installed EukRep following the conda instructions in the README, but while working, EukRep returns several numpy warnings about nomenclature changes with newer versions (numpy >= 1.20) that are installed by default now.
While you can silence them, I updated the conda command to be more strict with versions required. Also, the version in the release section in this github repo is marked as 0.6.6, but the one under bioconda is 0.6.7.
conda create -y -n eukrep-0.6.7 python=3.7 "numpy<1.20" "scikit-learn==0.19.2" "eukrep==0.6.7" -c conda-forge -c biocondaI hope this is useful for some other people out there.