Hello I am receiving this error. I made sure to download the ENIGMA data set and pointed the code to it. I ran randomise on some data and registered it to the enigma space
danielsalinas@Precision-3660-27104:~/neurosciencedata/BakerLab/FIT_ICVF-1-2/ENIGMA/stats$ /home/danielsalinas/pnl_randomise/lib/randomise_summary.py
Importing modules
Importing modules complete
- Summarizing information for files below
/home/danielsalinas/neurosciencedata/BakerLab/FIT_ICVF-1-2/ENIGMA/stats/tbss_FA_tfce_corrp_tstat1.nii.gz
Traceback (most recent call last):
File "/home/danielsalinas/pnl_randomise/lib/randomise_summary.py", line 144, in
corrp_map_classes, df = run_randomise_summary_basics(args)
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 545, in run_randomise_summary_basics
corrp_map_classes = get_corrp_map_classes(corrp_map_locs, args)
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 495, in get_corrp_map_classes
corrpMap = CorrpMap(corrp_map_loc,
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 145, in init
self.get_matrix_info()
File "/home/danielsalinas/pnl_randomise/lib/randomise_con_mat.py", line 147, in get_matrix_info
self.matrix_info.loc['unique values', col] = np.array2string(
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 736, in array2string
return _array2string(a, options, separator, prefix)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 513, in wrapper
return f(self, *args, **kwargs)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 546, in _array2string
lst = _formatArray(a, format_function, options['linewidth'],
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 889, in _formatArray
return recurser(index=(),
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 845, in recurser
word = recurser(index + (-i,), next_hanging_indent, next_width)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 799, in recurser
return format_function(a[index])
File "/home/danielsalinas/.local/lib/python3.10/site-packages/pandas/core/indexes/base.py", line 5423, in getitem
return self._constructor._simple_new(result, name=self._name)
File "/home/danielsalinas/.local/lib/python3.10/site-packages/pandas/core/indexes/base.py", line 659, in _simple_new
assert isinstance(values, cls._data_cls), type(values)
AssertionError: <class 'numpy.float64'>
Hello I am receiving this error. I made sure to download the ENIGMA data set and pointed the code to it. I ran randomise on some data and registered it to the enigma space
danielsalinas@Precision-3660-27104:~/neurosciencedata/BakerLab/FIT_ICVF-1-2/ENIGMA/stats$ /home/danielsalinas/pnl_randomise/lib/randomise_summary.py
Importing modules
Importing modules complete
Traceback (most recent call last):
File "/home/danielsalinas/pnl_randomise/lib/randomise_summary.py", line 144, in
corrp_map_classes, df = run_randomise_summary_basics(args)
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 545, in run_randomise_summary_basics
corrp_map_classes = get_corrp_map_classes(corrp_map_locs, args)
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 495, in get_corrp_map_classes
corrpMap = CorrpMap(corrp_map_loc,
File "/home/danielsalinas/pnl_randomise/lib/randomise_corrp.py", line 145, in init
self.get_matrix_info()
File "/home/danielsalinas/pnl_randomise/lib/randomise_con_mat.py", line 147, in get_matrix_info
self.matrix_info.loc['unique values', col] = np.array2string(
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 736, in array2string
return _array2string(a, options, separator, prefix)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 513, in wrapper
return f(self, *args, **kwargs)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 546, in _array2string
lst = _formatArray(a, format_function, options['linewidth'],
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 889, in _formatArray
return recurser(index=(),
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 845, in recurser
word = recurser(index + (-i,), next_hanging_indent, next_width)
File "/usr/local/lib/python3.10/dist-packages/numpy/core/arrayprint.py", line 799, in recurser
return format_function(a[index])
File "/home/danielsalinas/.local/lib/python3.10/site-packages/pandas/core/indexes/base.py", line 5423, in getitem
return self._constructor._simple_new(result, name=self._name)
File "/home/danielsalinas/.local/lib/python3.10/site-packages/pandas/core/indexes/base.py", line 659, in _simple_new
assert isinstance(values, cls._data_cls), type(values)
AssertionError: <class 'numpy.float64'>