Chore: version and other metadata changes (#6)

* feat: add streaming server and GitHub toolset

Add production-ready infrastructure for Bond agents:

## Server Module (bond.server)
- SSE and WebSocket streaming endpoints
- Session management with history
- CORS support and configuration
- Health check endpoint

## GitHub Toolset (bond.tools.github)
- 6 tools: get_repo, list_files, read_file, search_code, get_commits, get_pr
- GitHubAdapter with rate limit handling
- GitHubProtocol for backend flexibility

## Composite Dependencies (BondToolDeps)
- Single deps object for multiple toolsets
- Lazy adapter initialization
- Supports GitHub + GitHunter together

## Documentation
- guides/streaming-server.md - SSE/WebSocket integration
- guides/github.md - GitHub toolset usage

## Tests
- 36 new tests for server and GitHub modules

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* docs(ui): add bond.server integration instructions

- Option 1: Using bond.server with wrapper endpoint for UI
- Option 2: Custom SSE endpoint (simpler)
- SSE event format reference
- Future roadmap for full session-based integration

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat(ui): add input component

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat(ui): add dialog component

* feat(ui): add useBondServer hook for bond.server integration

* feat(ui): add ConnectDialog component

* feat(ui): add ChatInput component

* feat(ui): integrate bond.server with connect dialog and chat input

* test: add simple test server for UI integration

* docs: add bond-server ui integration plan

* fix(ui): resolve race condition in server connection flow

* fix: update test server CORS and add UI debugging logs

* fix: add localhost:5175 to CORS origins for test server

* fix(ui): normalize tool_delta events and add debug logging

* fix(ui): handle non-streaming complete event as text response

* fix(ui): ensure non-streaming complete event is handled for all messages

* feat(test): add list_files tool to test server

* fix(test): correct BondAgent initialization in test server

* fix(ui): re-index blocks to ensure unique IDs across conversation turns

* feat(server): add GitHub toolset and fix streaming tool visualization

- Add GitHub toolset to test server with BondToolDeps
- Fix SSE streaming race condition by using synchronous queue operations
- Fix tool event emission from PydanticAI message history
- Add justfile for easy demo setup (just demo, just demo-stop, etc.)
- Fix useBondServer complete event handling order
- Add rate limit handling instructions to agent
- Reduce max_retries to prevent rate limit loops

The tool visualization now works correctly - tool blocks show
arguments and results similar to the demo mode.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* chore: update pre-commit to auto-fix instead of just check

- ruff format: now auto-formats instead of --check
- ruff lint: now uses --fix to auto-fix fixable issues
- mypy: unchanged (cannot auto-fix type errors)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* docs: add missing server and GitHub API reference docs

Fix mkdocs --strict warnings:
- Create docs/api/server.md for server module API reference
- Add GitHub Toolset section to docs/api/tools.md
- Add Server to mkdocs.yml navigation

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* chore: config changes

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>

Author: bordumb

.gitignore

@@ -205,3 +205,6 @@ cython_debug/
 marimo/_static/
 marimo/_lsp/
 __marimo__/
+
+# project
+all_code_and_configs.txt

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "bond-agent"
-version = "0.1.1"
+version = "0.1.2"
 description = "The Forensic Runtime for AI agents - full-spectrum streaming with complete observability"
 readme = "README.md"
 requires-python = ">=3.11"