diff --git a/.env.example b/.env.example index 00336cc..cfc2709 100644 --- a/.env.example +++ b/.env.example @@ -29,6 +29,14 @@ TWILIO_ACCOUNT_SID= TWILIO_API_SID= TWILIO_API_SECRET= +######### +# MYSQL # +######### +MYSQL_ROOT_PASSWORD= +MYSQL_DATABASE= +MYSQL_USER= +MYSQL_PASSWORD= + ########### # URLSCAN # ########### @@ -57,4 +65,12 @@ SPLUNK_VERIFY_SSL=false PSQL_DSN=DSN=PostgresLocal; PSQL_USER=testuser PSQL_PASS=testpass -PSQL_DB=test_db \ No newline at end of file +PSQL_DB=test_db + +TRINO_HOST=localhost +TRINO_USER=youruser +TRINO_PORT=8080 +#optional +TRINO_CATALOG=test +TRINO_SCHEMA=test +TRINO_PASS=yourpassword diff --git a/.gitignore b/.gitignore index 157e856..62f32e8 100644 --- a/.gitignore +++ b/.gitignore @@ -6,6 +6,9 @@ __pycache__/ # C extensions *.so +# Trino +dev_env/etc/catalog/*.properties + # Distribution / packaging .Python build/ diff --git a/dev_env/etc/catalog/mysql.properties.example b/dev_env/etc/catalog/mysql.properties.example new file mode 100644 index 0000000..538a286 --- /dev/null +++ b/dev_env/etc/catalog/mysql.properties.example @@ -0,0 +1,4 @@ +connector.name=mysql +connection-url=jdbc:mysql://mysql-db:3306/target_db +connection-user= +connection-password= \ No newline at end of file diff --git a/dev_env/etc/catalog/pg.properties.example b/dev_env/etc/catalog/pg.properties.example new file mode 100644 index 0000000..94aa920 --- /dev/null +++ b/dev_env/etc/catalog/pg.properties.example @@ -0,0 +1,4 @@ +connector.name=postgresql +connection-url=jdbc:postgresql://postgres-db:5432/target_db +connection-user= +connection-password= \ No newline at end of file diff --git a/dev_env/postgres/test_postgres.py b/dev_env/postgres/test_postgres.py index 2e7eb3b..6226138 100644 --- a/dev_env/postgres/test_postgres.py +++ b/dev_env/postgres/test_postgres.py @@ -3,9 +3,8 @@ from typing import Dict, Any env_config: Dict[str, Any] = combine_env_configs() - logger = setup_logger("pg logger") -with PostgresConnector(conn_str=env_config["PGSQL_DSN"], logger=logger) as conn: +with PostgresConnector(conn_str=env_config["PSQL_DSN"], logger=logger) as conn: # Optional insert test logger.info("inserting one row") diff --git a/dev_env/trino/test_trino.py b/dev_env/trino/test_trino.py new file mode 100644 index 0000000..e0684e9 --- /dev/null +++ b/dev_env/trino/test_trino.py @@ -0,0 +1,20 @@ +from pyapiary.dbms_connectors.trino import TrinoConnector +from pyapiary.helpers import combine_env_configs +from typing import Dict, Any + +env_config: Dict[str, Any] = combine_env_configs() + + +client = TrinoConnector( + host=env_config["TRINO_HOST"], + port=env_config["TRINO_PORT"], + user=env_config["TRINO_USER"] +) + +# Find +print(client.query("SELECT * FROM pg.public.employees")) + + +mylist = [{'name':'Pat','department':'Facilities MGMT'}] + +print(client.bulk_insert('pg.public.employees',mylist)) \ No newline at end of file diff --git a/docker-compose.yml b/docker-compose.yml index f304506..517267c 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -9,6 +9,8 @@ services: environment: MONGO_INITDB_ROOT_USERNAME: ${MONGO_USER} MONGO_INITDB_ROOT_PASSWORD: ${MONGO_PASS} + networks: + - dev_lab elasticsearch: image: docker.elastic.co/elasticsearch/elasticsearch:7.17.10 @@ -20,6 +22,8 @@ services: ports: - "9200:9200" mem_limit: 512m + networks: + - dev_lab es-init: image: python:3.11-slim @@ -31,6 +35,8 @@ services: - ./.env entrypoint: > sh -c "pip install --quiet requests python-dotenv && python /init.py" + networks: + - dev_lab splunk: image: vivekrsplunk/splunk:9.2.1-78803f08aabb-ef8f72f-arm64-ubuntu-20 @@ -46,6 +52,8 @@ services: volumes: - ./dev_env/splunk/init_app.sh:/init_app.sh entrypoint: [ "/bin/bash", "-c", "/init_app.sh & /sbin/entrypoint.sh start-service" ] + networks: + - dev_lab # both PG and ODBC connector use this data source, this is why dev_env/postgres does not have an init.sql odbc_db: @@ -59,8 +67,37 @@ services: - "5432:5432" volumes: - ./dev_env/odbc/init.sql:/docker-entrypoint-initdb.d/init.sql:ro + networks: + - dev_lab + + mysql_db: + image: mysql:latest + environment: + MYSQL_ROOT_PASSWORD: ${MYSQL_ROOT_PASSWORD} + MYSQL_DATABASE: ${MYSQL_TARGET_DB} + MYSQL_USER: ${MYSQL_USER} + MYSQL_PASSWORD: ${MYSQL_PASSWORD} + ports: + - "3306:3306" + networks: + - dev_lab proxy: image: ubuntu/squid:latest ports: - "3128:3128" + networks: + - dev_lab + + trino: + image: trinodb/trino:latest + ports: + - "8080:8080" + volumes: + - ./etc/catalog:/etc/trino/catalog + networks: + - dev_lab + +networks: + dev_lab: + external: true \ No newline at end of file diff --git a/poetry.lock b/poetry.lock index 66beeaf..10f3906 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 2.3.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.4.0 and should not be changed by hand. 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b/src/pyapiary/dbms_connectors/trino.py index e69de29..2107ade 100644 --- a/src/pyapiary/dbms_connectors/trino.py +++ b/src/pyapiary/dbms_connectors/trino.py @@ -0,0 +1,32 @@ +from trino.dbapi import connect +from typing import List, Dict, Any + +class TrinoConnector: + def __init__(self, host, port, user, catalog=None, schema=None): + self.conn = connect( + host=host, + port=port, + user=user, + catalog=catalog, + schema=schema + ) + + def query(self, query_str): + with self.conn.cursor() as cur: + cur.execute(query_str) + if cur.description: + return cur.fetchall() + else: + return None + + def bulk_insert(self, table, data : List[Dict[str,Any]]): + if not len(data)>0: + print('Invalid List of Dict type passed. Must have more than one element.') + return None + columns = data[0].keys() + placeholders = ", ".join(["?"] * len(columns)) + query = f"INSERT INTO {table} ({', '.join(columns)}) VALUES ({placeholders})" + values = [tuple(row[col] for col in columns) for row in data] + with self.conn.cursor() as cur: + cur.executemany(query, values) + return True \ No newline at end of file diff --git a/src/pyapiary/tests/test_trino/test_unit_trino.py b/src/pyapiary/tests/test_trino/test_unit_trino.py new file mode 100644 index 0000000..fb5113d --- /dev/null +++ b/src/pyapiary/tests/test_trino/test_unit_trino.py @@ -0,0 +1,200 @@ +import pytest +from unittest.mock import MagicMock, patch, call +from pyapiary.dbms_connectors.trino import TrinoConnector + + +@pytest.fixture +def mock_connect(mocker): + """Patch trino.dbapi.connect and return the mock connection.""" + mock_conn = MagicMock() + mocker.patch("pyapiary.dbms_connectors.trino.connect", return_value=mock_conn) + return mock_conn + + +@pytest.fixture +def connector(mock_connect): + """Return a TrinoConnector backed by a mocked connection.""" + return TrinoConnector( + host="localhost", + port=8080, + user="test_user", + catalog="hive", + schema="default", + ) + + +# --------------------------------------------------------------------------- +# __init__ +# --------------------------------------------------------------------------- + +class TestInit: + def test_connect_called_with_correct_args(self, mocker): + mock_connect = mocker.patch("pyapiary.dbms_connectors.trino.connect") + TrinoConnector(host="myhost", port=9090, user="alice", catalog="iceberg", schema="raw") + mock_connect.assert_called_once_with( + host="myhost", + port=9090, + user="alice", + catalog="iceberg", + schema="raw", + ) + + def test_connect_called_without_optional_args(self, mocker): + mock_connect = mocker.patch("pyapiary.dbms_connectors.trino.connect") + TrinoConnector(host="myhost", port=9090, user="alice") + mock_connect.assert_called_once_with( + host="myhost", + port=9090, + user="alice", + catalog=None, + schema=None, + ) + + def test_conn_attribute_set(self, mock_connect, connector): + assert connector.conn is mock_connect + + +# --------------------------------------------------------------------------- +# query() +# --------------------------------------------------------------------------- + +class TestQuery: + def test_returns_rows_when_description_present(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.description = [("col1",), ("col2",)] + mock_cursor.fetchall.return_value = [(1, "a"), (2, "b")] + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + result = connector.query("SELECT * FROM foo") + + mock_cursor.execute.assert_called_once_with("SELECT * FROM foo") + mock_cursor.fetchall.assert_called_once() + assert result == [(1, "a"), (2, "b")] + + def test_returns_none_when_no_description(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.description = None + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + result = connector.query("CREATE TABLE foo (id INT)") + + mock_cursor.execute.assert_called_once_with("CREATE TABLE foo (id INT)") + mock_cursor.fetchall.assert_not_called() + assert result is None + + def test_returns_empty_list_for_empty_result_set(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.description = [("id",)] + mock_cursor.fetchall.return_value = [] + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + result = connector.query("SELECT * FROM empty_table") + + assert result == [] + + def test_cursor_used_as_context_manager(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.description = None + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + connector.query("SELECT 1") + + mock_connect.cursor.return_value.__enter__.assert_called_once() + mock_connect.cursor.return_value.__exit__.assert_called_once() + + def test_propagates_execute_exception(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.execute.side_effect = RuntimeError("syntax error") + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + with pytest.raises(RuntimeError, match="syntax error"): + connector.query("SELECT bad syntax %%") + + +# --------------------------------------------------------------------------- +# bulk_insert() +# --------------------------------------------------------------------------- + +class TestBulkInsert: + def test_inserts_single_row(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + result = connector.bulk_insert("my_table", [{"id": 1, "name": "alice"}]) + + expected_query = "INSERT INTO my_table (id, name) VALUES (?, ?)" + mock_cursor.executemany.assert_called_once_with( + expected_query, [(1, "alice")] + ) + assert result is True + + def test_inserts_multiple_rows(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + data = [ + {"id": 1, "val": "a"}, + {"id": 2, "val": "b"}, + {"id": 3, "val": "c"}, + ] + result = connector.bulk_insert("my_table", data) + + expected_values = [(1, "a"), (2, "b"), (3, "c")] + _, call_values = mock_cursor.executemany.call_args + # positional args + actual_values = mock_cursor.executemany.call_args[0][1] + assert actual_values == expected_values + assert result is True + + def test_returns_none_for_empty_list(self, mock_connect, connector, capsys): + result = connector.bulk_insert("my_table", []) + + assert result is None + captured = capsys.readouterr() + assert "Invalid" in captured.out + + def test_empty_list_does_not_touch_cursor(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + connector.bulk_insert("my_table", []) + + mock_cursor.executemany.assert_not_called() + + def test_query_string_uses_correct_table_name(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + connector.bulk_insert("schema.target_table", [{"x": 99}]) + + actual_query = mock_cursor.executemany.call_args[0][0] + assert "schema.target_table" in actual_query + + def test_column_order_matches_first_row_keys(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + data = [{"z": 3, "a": 1, "m": 2}] + connector.bulk_insert("t", data) + + actual_query = mock_cursor.executemany.call_args[0][0] + # columns in query should match key order of first dict + for col in ["z", "a", "m"]: + assert col in actual_query + + def test_propagates_executemany_exception(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_cursor.executemany.side_effect = RuntimeError("DB write error") + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + with pytest.raises(RuntimeError, match="DB write error"): + connector.bulk_insert("t", [{"id": 1}]) + + def test_cursor_used_as_context_manager(self, mock_connect, connector): + mock_cursor = MagicMock() + mock_connect.cursor.return_value.__enter__.return_value = mock_cursor + + connector.bulk_insert("t", [{"id": 1}]) + + mock_connect.cursor.return_value.__enter__.assert_called_once() + mock_connect.cursor.return_value.__exit__.assert_called_once() \ No newline at end of file