From 9954899e9cb58713f97d76588e7edf77d3498507 Mon Sep 17 00:00:00 2001
From: Anton Larsson <anton.larsson@ki.se>
Date: Tue, 14 Jun 2022 15:44:52 +0200
Subject: [PATCH] Update ConvperPos.py

---
 scripts/ConvperPos.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/scripts/ConvperPos.py b/scripts/ConvperPos.py
index 2b9165d..809dcca 100755
--- a/scripts/ConvperPos.py
+++ b/scripts/ConvperPos.py
@@ -39,7 +39,7 @@ def CountReadConverPerConvPos(bam,ContigLocs):
         ConvsPerPos[key]={}
         k=0
         current=ContigLocs[key][k]
-        if len(ContigLocs[key][k]) == 1:
+        if len(ContigLocs[key]) == 1:
             ConvsPerPos[key][current] = 1
         else:
             k+=1