Problems with deriving pvalues

[nvanzuyaz]

Hi,

When I try to run paradigm I get the following error.

Error in rep.int(rep.int(seq_len(nx), rep.int(rep.fac, nx)), orep) :
invalid 'times' value
Calls: PARADIGM ... paradigm.graph -> .cpt.hidden.values -> expand.grid

PARADIGM(data = list(px, tx),

•      levels = c("protein", "rna"),
  

•      network = mbnetwork,
  

•      #node.types = NULL,
  

•      epsilon = 0.001,
  

•      pvalues = TRUE,
  

•      perm.type = "within",
  

•      iterations = 1000,
  

•      processors = 1)
  

Sorry but I cannot share a reproducible example due to the data that I am working with.

Thanks,
Natalie

[cvaske]

This appears to be R code, whereas Paradigm was written in C++. Can you share a bit about what system this is being run on?