Skip to content

Use bioformats reader as a fallback and allow more filetypes #826

@jstriebel

Description

@jstriebel

Detailed Description

Affected library: webknossos

Currently, ds.add_layer_from_images() and Dataset.from_images() can use the pims bioformats reader when use_bioformats is explicitly set to true. It would be great to use the bioformats reader as a fallback and for unsupported datatypes anyways. We should check if the listed file suffixes should be monkey-patched to contain all possible ones (see also soft-matter/pims#357), or if a second try using the BioformatsReader directly is more appropriate.

Metadata

Metadata

Assignees

No one assigned

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions