diff --git a/data/samplesheets/191211_SN737_0487_BCDVUBACXX_spike.csv b/data/samplesheets/191211_SN737_0487_BCDVUBACXX_spike.csv new file mode 100644 index 00000000..ca3ac831 --- /dev/null +++ b/data/samplesheets/191211_SN737_0487_BCDVUBACXX_spike.csv @@ -0,0 +1,58 @@ +[Header],,,,,,,,,,, +IEMFileVersion,5,,,,,,,,,, +Date,12/11/19,,,,,,,,,, +Workflow,GenerateFASTQ,,,,,,,,,, +Investigator,Marina Oldenburg,,,,,,,,,, +Application,HiSeq FASTQ,,,,,,,,,, +Instrument Type,HiSeq 1500/2500,,,,,,,,,, +Assay,Agilent_Sure_SelectXT,,,,,,,,,, +Index Adapters,Agilent_Sure_SelectXT,,,,,,,,,, +Description,,,,,,,,,,, +Chemistry,Default,,,,,,,,,, +Operator,Daniel Scholtyssik,,,,,,,,,, +Backup_NAS_name,Ingerimm,,,,,,,,,, +kind_of_run,2x101bp,,,,,,,,,, +[Reads],,,,,,,,,,, +101,,,,,,,,,,, +101,,,,,,,,,,, +,,,,,,,,,,, +[Settings],,,,,,,,,,, +ReverseComplement,0,,,,,,,,,, +Adapter,AGATCGGAAGAGCACACGTCTGAACTCCAGTCA,,,,,,,,,, +AdapterRead2,AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT,,,,,,,,,, +,,,,,,,,,,, +[Data],,,,,,,,,,, +Lane,Sample_ID,Sample_Name,Sample_Plate,Sample_Well,I7_Index_ID,index,Sample_Project,Description,spike_entity_id,spike_entity_role,spike_ignore_sample +1,mMYD_352_T,,,,A02,AGCAGGAA,Maus_Hauer,,MMYD_352,tumor, +1,mMYD_353_N,,,,B02,GAGCTGAA,Maus_Hauer,,mMYD_353,healthy, +1,mMYD_353_T,,,,C02,AAACATCG,Maus_Hauer,,mMYD_353,tumor, +1,mMYD_354_N,,,,D02,GAGTTAGC,Maus_Hauer,,MMYD_354,healthy, +2,mMYD_354_T,,,,A02,AGCAGGAA,Maus_Hauer,,MMYD_354,tumor, +2,mNU_362_N,,,,B02,GAGCTGAA,Maus_Hauer,,MNU_362,healthy, +2,mNU_362_T,,,,C02,AAACATCG,Maus_Hauer,,MNU_362,tumor, +2,mRJ_366_N,,,,D02,GAGTTAGC,Maus_Hauer,,MRJ_366_C2,healthy, +3,mRJ_366_T1,,,,A02,AGCAGGAA,Maus_Hauer,,MRJ_366,, +3,mRJ_366_T2,,,,B02,GAGCTGAA,Maus_Hauer,,MRJ_366_C2,tumor, +3,mCD_367_N,,,,C02,AAACATCG,Maus_Hauer,,MCD_367,healthy, +3,mCD_367_T,,,,D02,GAGTTAGC,Maus_Hauer,,MCD_367,tumor, +4,mMYD_370_N,,,,A02,AGCAGGAA,Maus_Hauer,,MMYD_370,healthy, +4,mMYD_370_T,,,,B02,GAGCTGAA,Maus_Hauer,,MMYD_370,tumor, +4,mMYD_371_N,,,,C02,AAACATCG,Maus_Hauer,,MMYD_371,healthy, +4,mMYD_371_T,,,,D02,GAGTTAGC,Maus_Hauer,,MMYD_371,tumor, +5,mMYD_372_N,,,,A02,AGCAGGAA,Maus_Hauer,,MMYD_372,healthy, +5,mMYD_372_T,,,,B02,GAGCTGAA,Maus_Hauer,,MMYD_372,tumor, +5,mMYD_373_N,,,,C02,AAACATCG,Maus_Hauer,,MMYD_373,healthy, +5,mMYD_373_T,,,,D02,GAGTTAGC,Maus_Hauer,,MMYD_373,tumor, +6,mMYD_376_N,,,,E02,CGAACTTA,Maus_Hauer,,MMYD_376,healthy, +6,mMYD_376_T,,,,F02,GATAGACA,Maus_Hauer,,MMYD_376,tumor, +6,mMYD_377_N,,,,G02,AAGGACAC,Maus_Hauer,,MMYD_377,healthy, +6,mMYD_377_T,,,,H02,GACAGTGC,Maus_Hauer,,MMYD_377,tumor, +6,mRJ_381_T2,,,,C02,AAACATCG,Maus_Hauer,,MRJ_381_C2,tumor, +7,mCD_378_N,,,,A02,AGCAGGAA,Maus_Hauer,,MCD_378,healthy, +7,mCD_378_T,,,,B02,GAGCTGAA,Maus_Hauer,,MCD_378,tumor, +7,mAB_379_N,,,,C02,AAACATCG,Maus_Hauer,,MAB_379,healthy, +7,mAB_379_T,,,,D02,GAGTTAGC,Maus_Hauer,,MAB_379,tumor, +8,mRJ_380_N,,,,A02,AGCAGGAA,Maus_Hauer,,MRJ_380,healthy, +8,mRJ_380_T1,,,,B02,GAGCTGAA,Maus_Hauer,,MRJ_380,tumor, +8,mRJ_381_N,,,,C02,AAACATCG,Maus_Hauer,,MRJ_381_C2,healthy, +8,mRJ_381_T1,,,,D02,GAGTTAGC,Maus_Hauer,,MRJ_381,,