diff --git a/data/samplesheets/191009_SN737_0479_ACDU95ACXX_spike.csv b/data/samplesheets/191009_SN737_0479_ACDU95ACXX_spike.csv new file mode 100644 index 00000000..7cd1c746 --- /dev/null +++ b/data/samplesheets/191009_SN737_0479_ACDU95ACXX_spike.csv @@ -0,0 +1,56 @@ +[Header],,,,,,,,,,, +IEMFileVersion,5,,,,,,,,,, +Date,10/09/19,,,,,,,,,, +Workflow,GenerateFASTQ,,,,,,,,,, +Application,HiSeq FASTQ Only,,,,,,,,,, +Instrument Type,HiSeq 1500/2500,,,,,,,,,, +Assay,Agilent_Sure_SelectXT,,,,,,,,,, +Index Adapters,Agilent_Sure_SelectXT,,,,,,,,,, +Description,,,,,,,,,,, +Chemistry,Default,,,,,,,,,, +Investigator,Ute Fischer/ Vera Jepsen ,,,,,,,,,, +Backup_NAS_name,Ingerimm,,,,,,,,,, +kind_of_run,2x101bp,,,,,,,,,, +[Reads],,,,,,,,,,, +101,,,,,,,,,,, +101,,,,,,,,,,, +,,,,,,,,,,, +[Settings],,,,,,,,,,, +ReverseComplement,0,,,,,,,,,, +Adapter,AGATCGGAAGAGCACACGTCTGAACTCCAGTCA,,,,,,,,,, +AdapterRead2,AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT,,,,,,,,,, +,,,,,,,,,,, +[Data],,,,,,,,,,, +Lane,Sample_ID,Sample_Name,Sample_Plate,Sample_Well,I7_Index_ID,index,Sample_Project,Description,spike_entity_id,spike_entity_role,spike_ignore_sample +1,3430_ini,,,,A01,ATGCCTAA,ETV6_RUNX1,set1,3430,, +1,3430_rem,,,,B01,GAATCTGA,ETV6_RUNX1,set1,3430_C2,healthy, +1,3430_rez,,,,C01,AACGTGAT,ETV6_RUNX1,set1,3430_C2,tumor, +1,2550_ini,,,,D01,CACTTCGA,ETV6_RUNX1,set1,2550,, +2,3430_ini,,,,A01,ATGCCTAA,ETV6_RUNX1,set1,3430,, +2,3430_rem,,,,B01,GAATCTGA,ETV6_RUNX1,set1,3430_C2,healthy, +2,3430_rez,,,,C01,AACGTGAT,ETV6_RUNX1,set1,3430_C2,tumor, +2,2550_ini,,,,D01,CACTTCGA,ETV6_RUNX1,set1,2550,, +3,2550_rem,,,,E01,GCCAAGAC,ETV6_RUNX1,set2,2550_C2,healthy, +3,2550_rez,,,,F01,GACTAGTA,ETV6_RUNX1,set2,2550_C2,tumor, +3,2765_ini,,,,G01,ATTGGCTC,ETV6_RUNX1,set2,2765,, +3,2765_rem,,,,H01,GATGAATC,ETV6_RUNX1,set2,2765_C2,healthy, +4,2550_rem,,,,E01,GCCAAGAC,ETV6_RUNX1,set2,2550_C2,healthy, +4,2550_rez,,,,F01,GACTAGTA,ETV6_RUNX1,set2,2550_C2,tumor, +4,2765_ini,,,,G01,ATTGGCTC,ETV6_RUNX1,set2,2765,, +4,2765_rem,,,,H01,GATGAATC,ETV6_RUNX1,set2,2765_C2,healthy, +5,2765_rez,,,,A01,ATGCCTAA,ETV6_RUNX1,set3,2765_C2,tumor, +5,3482_ini,,,,B01,GAATCTGA,ETV6_RUNX1,set3,3482,, +5,3482_rem,,,,C01,AACGTGAT,ETV6_RUNX1,set3,3482_C2,healthy, +5,3482_rez,,,,D01,CACTTCGA,ETV6_RUNX1,set3,3482_C2,tumor, +6,2765_rez,,,,A01,ATGCCTAA,ETV6_RUNX1,set3,2765_C2,tumor, +6,3482_ini,,,,B01,GAATCTGA,ETV6_RUNX1,set3,3482,, +6,3482_rem,,,,C01,AACGTGAT,ETV6_RUNX1,set3,3482_C2,healthy, +6,3482_rez,,,,D01,CACTTCGA,ETV6_RUNX1,set3,3482_C2,tumor, +7,3565_ini,,,,E01,GCCAAGAC,ETV6_RUNX1,set4,3565,, +7,3565_rem,,,,F01,GACTAGTA,ETV6_RUNX1,set4,3565_C2,healthy, +7,3565_rez,,,,G01,ATTGGCTC,ETV6_RUNX1,set4,3565_C2,tumor, +7,2578_ini,,,,H01,GATGAATC,ETV6_RUNX1,set4,2578,, +8,3565_ini,,,,E01,GCCAAGAC,ETV6_RUNX1,set4,3565,, +8,3565_rem,,,,F01,GACTAGTA,ETV6_RUNX1,set4,3565_C2,healthy, +8,3565_rez,,,,G01,ATTGGCTC,ETV6_RUNX1,set4,3565_C2,tumor, +8,2578_ini,,,,H01,GATGAATC,ETV6_RUNX1,set4,2578,,