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autoencoder.py
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329 lines (220 loc) · 10.1 KB
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# -*- coding: utf-8 -*-
"""autoencoder.ipynb
Automatically generated by Colaboratory.
Original file is located at
https://colab.research.google.com/drive/1oJ1Fg7geHRQcMHIpQtZYni1DLhJKWcyX
"""
# Commented out IPython magic to ensure Python compatibility.
# %cd ../
# Commented out IPython magic to ensure Python compatibility.
# %cd ./content/drive/MyDrive
!pip install flwr
#Autoencoder
import torch
from torch import device, no_grad
from torch.cuda import is_available
from torch.nn import Linear, Module, MSELoss, ReLU, Sequential, Sigmoid, ELU
from torch.optim import Adam
from torch.utils.data import Dataset, DataLoader, SubsetRandomSampler, random_split
from torchvision import transforms
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import StandardScaler
import pandas as pd
import flwr as fl
from collections import OrderedDict
from typing import Dict, Tuple
from flwr.common import NDArrays, Scalar
data = pd.read_csv("./Autoencoder/creditcard_csv.csv")
data.head()
#data = data.drop(['Time','Amount'], axis=1)
str_map = {"'0'": 0, "'1'": 1}
data['Class'] = data['Class'].map(lambda x: str_map[x])
data.head()
class CustomDataset(Dataset):
def __init__(self,data, label_column='Class',transform=None):
self.data = data
self.features = torch.tensor(self.data.drop(columns=[label_column]).values, dtype=torch.float32)
self.labels = torch.tensor(self.data[label_column].values, dtype=torch.float32)
self.transform = transform
def __len__(self):
return len(self.data)
def __getitem__(self, idx):
feature = self.features[idx]
label = self.labels[idx]
sample = {"features": feature, "label": label}
if self.transform:
sample = self.transform(sample)
return sample
class NormalizeStandard(object):
def __init__(self):
self.standard_scaler = StandardScaler()
def __call__(self, sample):
feature, label = sample['features'], sample['label']
feature = torch.tensor(self.standard_scaler.fit_transform(feature.reshape(1, -1)), dtype=torch.float32).squeeze()
return {"features": feature, "label": label}
#Federated splitting between clients
def prepare_dataset(train_dataset,test_dataset,num_part:int, batch_size: int):
trainloader = []
testloader = []
dataset_len = len(train_dataset)
# Create a list of partition lengths
partion_Len = [dataset_len // num_part] * num_part
# Add any remaining elements to the last partition
partion_Len[-1] += dataset_len % num_part
# Split the dataset into multiple smaller datasets
trainsets = random_split(train_dataset, partion_Len)
for train in trainsets:
trainloader.append(DataLoader(train,batch_size=batch_size,shuffle=True))
test_len = len(test_dataset)
partion = [test_len // num_part] * num_part
partion[-1] += test_len % num_part
testsets = random_split(test_dataset,partion)
for test in testsets:
testloader.append(DataLoader(test,batch_size=batch_size,shuffle=True))
return trainloader,testloader
def preprocessing_data(dataset,num_part:int, split:int,batch_size:int):
trainloader = []
testloader = []
label_column_name = "Class"#Label name for bengign
#Preprocessing
transform = transforms.Compose([NormalizeStandard()])
######
custom_dataset = CustomDataset(data, label_column=label_column_name,transform=transform)
all_train_data, test_data = train_test_split(data, test_size=split, stratify=data[label_column_name].values, random_state=42)
# Filter train data to keep only samples with label 0
train_data = all_train_data[all_train_data[label_column_name] == 0]
train_dataset = CustomDataset(train_data, label_column=label_column_name, transform=transform)
test_dataset = CustomDataset(test_data, label_column=label_column_name, transform=transform)
trainloader,testloader = prepare_dataset(train_dataset,test_dataset,num_part,batch_size)
return trainloader,testloader
class Autoencoder(Module):
@staticmethod
def get_non_linear(param):
def get_one(param):
if param == 'relu':
return ReLU(inplace=True)
if param == 'sigmoid':
return Sigmoid()
if param == 'elu':
return ELU()
return None
decoder_non = get_one(param[0])
encoder_non_linearity = get_one(param[1])
return encoder_non_linearity, decoder_non
@staticmethod
def build_layers(sizes, non_linearity=None):
linears = [Linear(m, n) for m, n in zip(sizes[:-1], sizes[1:])]
if non_linearity:
layers = [item for pair in zip(linears, non_linearity) for item in pair]
else:
layers = linears
return Sequential(*layers)
def __init__(self,
input_dimension,
encoder_sizes=[16, 8, 4, 2],
encoder_non_linearity='relu',
decoder_sizes=[],
decoder_non_linearity='relu'):
super(Autoencoder, self).__init__()
self.input_dimension = input_dimension
self.encoder_sizes = [input_dimension] + encoder_sizes
self.decoder_sizes = decoder_sizes if decoder_sizes else encoder_sizes[::-1]
encoder_non_linearity, decoder_non_linearity = self.get_non_linear([encoder_non_linearity, decoder_non_linearity])
self.encoder = self.build_layers(self.encoder_sizes, non_linearity=encoder_non_linearity)
self.decoder = self.build_layers(self.decoder_sizes + [input_dimension], non_linearity=decoder_non_linearity)
self.encode = True
self.decode = True
def forward(self, x):
if self.encode:
x = self.encoder(x)
if self.decode:
x = self.decoder(x)
return x
def n_encoded(self):
return self.encoder_sizes[-1]
def train(loader,model,optimizer,criterion,device:str):
Losses = []
N = 100
model.train()
model.to(dev)
for epoch in range(N):
loss = 0
for data in loader:
feature,label = data[0].to(dev), data[1].to(dev)
optimizer.zero_grad()
train_loss = criterion(features,labels)
train_loss.backward()
optimizer.step()
loss += train_loss.item()
Losses.append(loss / len(loader))
print(f'epoch : {epoch+1}/{N}, loss = {Losses[-1]:.6f}')
return Losses
def test(loader,model,device:str,criterion):
correct, loss = 0,0.0
model.eval()
model.to(device)
with torch.no_grad():
for data in loader:
feature,label = data[0].to(dev), data[1].to(dev)
outputs = model(feature)
loss += criterion(outputs,label).item()
_,predicted = torch.max(outputs.data,1)
correct += (predicted == labels).sum().item()
accuracy = correct / len(loader.dataset)
return loss,accuracy
class FlowerClient(fl.client.NumPyClient):
def __init__(self,trainloader,input_dimension,encoder_non_linearity,decoder_non_linearity):
super().__init__()
self.trainloader = trainloader
self.model = Autoencoder(input_dimension =input_dimension,
encoder_non_linearity = encoder_non_linearity,
decoder_non_linearity = decoder_non_linearity)
self.device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
def set_parameters(self,parameters):
params_dict = zip(self.model.state_dict().keys(), parameters)
state_dict = OrderedDict({k: torch.tensor(v) for k,v in params_dict})
self.model.load_state_dict(state_dict, strict = True)
def get_parameters(self, config: Dict[str, Scalar]):
return [val.cpu().numpy() for _,val in self.model.state_dict().items()]
def fit(self,parameters):
self.set_parameters(parameters)
optimizer = Adam(self.model.parameters(),lr = 0.001)
criterion = MSELoss()
print("Training the client")
#do local training
train(self.model,self.trainloader,optimizer,criterion,self.device)
return self.model.get_parameters(), len(self.trainloader), () #returning the updated weights, () is the additonalal information returned energy
def generate_client_fn(ctrainloader,input_dimension,encoder_non_linearity,decoder_non_linearity):
def client_fn(cid: str):
return FlowerClient(trainloader=trainloader[int(cid)],input_dimension= input_dimension,encoder_non_linearity=encoder_non_linearity,decoder_non_linearity=decoder_non_linearity)
return client_fn
#Server side part
#Return the configration to the client
def get_on_fit_config(config: DictConfig):
def fit_config_fn(server_round: int):
return {}
return fit_config_fn
#Main file
#loading datasets
trainloader,testloader = preprocessing_data("xyz",10,0.2,64)
for train in trainloader:
print(f"Train data dimension: {len(train.dataset)}")
for test in testloader:
print(f"Test data dimension: {len(test.dataset)}")
data_iter = iter(trainloader[0])
first_batch = next(data_iter)
input_dimension = first_batch['features'].shape[1]
print("Shape of the input dimesion : ", input_dimension)
encoder_non_linearity,decoder_non_linearity = Autoencoder.get_non_linear(['relu','relu'])
client_fn = generate_client_fn(trainloader,input_dimension,encoder_non_linearity,decoder_non_linearity)
strategy = fl.server.strategy.FedAvg(
fraction_fit=0.0, # in simulation, since all clients are available at all times, we can just use `min_fit_clients` to control exactly how many clients we want to involve during fit
min_fit_clients=2, # number of clients to sample for fit()
fraction_evaluate=0.0, # similar to fraction_fit, we don't need to use this argument.
min_evaluate_clients=1, # number of clients to sample for evaluate()
min_available_clients=10, # total clients in the simulation
on_fit_config_fn=get_on_fit_config(
cfg.config_fit
), # a function to execute to obtain the configuration to send to the clients during fit()
evaluate_fn=get_evaluate_fn(cfg.num_classes, testloader),
) # a function to run on the server side to evaluate the global model.