Lab/Experiment Hosting Request for Plant Metabolic Engineering Lab

[prakriti5dhang]

Lab/Experiment(s) Hosting Request

1. Coordinating Institute: Indian Institute of Technology Kharagpur

2. Name of the Lab: Plant Metabolic Engineering Lab

3. Domain Name: Biotechnology and Biomedical Engineering

4. Virtual Lab Phase: Extended Phase 3

5. Proposal: Plant Metabolic Engineering Lab

6. Approval: Plant Metabolic Engineering Lab

7. Hosting Unit:

No.	Experiment Name	Experiment Repository URL	Branch/Tag
1	Virtual experiments to study characteristics of plant cells and genomes	https://github.com/virtual-labs/exp-plant-cells-genomes-iitkgp	v1.0.2
2	Gene isolation and characterisation, gene expression, gene regulation in plants	https://github.com/virtual-labs/exp-gene-isolation-iitkgp	v1.0.0
3	Genetic transformation techniques- Gene gun mediated, Agrobacterium mediated transformation - Overexpression, antisense expression (in model as well as crop plants)	https://github.com/virtual-labs/exp-genetic-transformation-techniques-iitkgp	v1.0.0
4	Genome sequencing in crop plants	https://github.com/virtual-labs/exp-genome-sequencing-iitkgp	v1.0.0
5	Gene stacking- Improved trait introduction into local cultivars	https://github.com/virtual-labs/exp-gene-stacking-iitkgp	v1.0.0
6	Metabolic flux determination, pathway engineering in plants	https://github.com/virtual-labs/exp-metabolic-flux-iitkgp	v1.0.0
7	Gene editing methods in plants	https://github.com/virtual-labs/exp-gene-editing-plants-iitkgp	v1.0.0
8	Synthetic Biology techniques	https://github.com/virtual-labs/exp-synthetic-biology-techniques-iitkgp	v1.0.1

8. Introduction:
   A complete hands-on will provide students a complete understanding of all these concepts of plant metabolic. Visualization will help them see the experimental results under different environments and conditions. Students will be able to play with the options to get more insights about these concepts.
   After these virtual lab experiments, students will be able to do experiments in real lab and will also be equipped to handle and realize many practical communication systems.

9. Objective:
   To provide students hands-on experience and basic understanding of key concepts of Plant Metabolic Engineering.

10. Course Alignment:
    All colleges offering programs that have B.Tech Biotechnology, Metabolic Engineering; Courses on Plant Biology, Plant Genetic Engineering.

11. Discipline:

• Plant Biology - BS211
• Synthetic and Systems Biology
• Animal and Plant biotechnology

12. Target Audience:
    UG (3rd Year- 5th semester)

13. GitHub Handle:

Primary GitHub Handle Details:

Name: Virtual Labs IIT Kharagpur

GitHub Handle: @VLabs-IITKharagpur

Email id: vlabsiitkgpaws@gmail.com

Secondary GitHub Handle Details:

Name: Prakriti Dhang

GitHub Handle: @prakriti5dhang

Email id: prakritidhang@gmail.com

[ravikiran2020]

@prakriti5dhang Could you please let us know under which domain this need to be hosted.

[prakriti5dhang]

@ravikiran2020
Domain name: Biotechnology and Biomedical Engineering

[ravikiran2020]

@prakriti5dhang You have provided github.io link instead of github repository link. Please update it and provide the repositories link of the experiments.

[ravikiran2020]

@prakriti5dhang The tags for the each experiment is tagged with uppercase V1.0.0 instead of lowercase v1.0.0.

Request you create the correct tag (lowercase) for the each experiment.

[prakriti5dhang]

@ravikiran2020 Updated the experiments with the GitHub repository link and tagged with lowercase v1.0.0

[ravikiran2020]

@prakriti5dhang Lab is re-hosted.

url: pme-iitkgp.vlabs.ac.in

please check and approve.

[prakriti5dhang]

@ravikiran2020
Modified the below experiments and created tag. Kindly update the changes.
Virtual experiments to study characteristics of plant cells and genomes | https://github.com/virtual-labs/exp-plant-cells-genomes-iitkgp | v1.0.2
Synthetic Biology techniques | https://github.com/virtual-labs/exp-synthetic-biology-techniques-iitkgp | v1.0.1

[ravikiran2020]

@prakriti5dhang Lab is re-hosted successfully.

[prakriti5dhang]

@ravikiran2020 Experiments are working fine.