HMP16SData/NAMESPACE at devel · waldronlab/HMP16SData · GitHub

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# Generated by roxygen2: do not edit by hand

export("%>%")
export(as_phyloseq)
export(attach_dbGaP)
export(kable_one)
export(table_one)
importFrom(AnnotationHub,query)
importFrom(ExperimentHub,ExperimentHub)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,as.data.frame)
importFrom(S4Vectors,as.matrix)
importFrom(S4Vectors,metadata)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(assertthat,assert_that)
importFrom(assertthat,has_extension)
importFrom(assertthat,is.readable)
importFrom(dplyr,arrange)
importFrom(dplyr,case_when)
importFrom(dplyr,desc)
importFrom(dplyr,distinct)
importFrom(dplyr,full_join)
importFrom(dplyr,inner_join)
importFrom(dplyr,mutate)
importFrom(dplyr,rename)
importFrom(dplyr,select)
importFrom(kableExtra,add_header_above)
importFrom(kableExtra,group_rows)
importFrom(kableExtra,kable_styling)
importFrom(kableExtra,row_spec)
importFrom(knitr,kable)
importFrom(magrittr,"%<>%")
importFrom(magrittr,"%>%")
importFrom(magrittr,add)
importFrom(magrittr,extract)
importFrom(magrittr,extract2)
importFrom(magrittr,set_colnames)
importFrom(magrittr,set_names)
importFrom(magrittr,set_rownames)
importFrom(magrittr,subtract)
importFrom(magrittr,use_series)
importFrom(methods,"slot<-")
importFrom(methods,is)
importFrom(methods,slot)
importFrom(methods,slotNames)
importFrom(readr,cols)
importFrom(readr,read_tsv)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(utils,globalVariables)
importFrom(utils,head)
importFrom(utils,read.csv)