Thank you for developing this tool!
According to the instruction: The extension of the input data file can be either .rds or .txt. It should include following columns: SNP, SNP ID; A1, effect allele; A2, reference allele; N, sample size; Z, z-score; If Z is not available, alternatively, you may provide: b, estimate of marginal effect in GWAS; and se, standard error of the estimates of marginal effects in GWAS.
So, can I conclude that the genome build of input summary statistics is not important for HDL?
Thank you for developing this tool!
According to the instruction: The extension of the input data file can be either .rds or .txt. It should include following columns: SNP, SNP ID; A1, effect allele; A2, reference allele; N, sample size; Z, z-score; If Z is not available, alternatively, you may provide: b, estimate of marginal effect in GWAS; and se, standard error of the estimates of marginal effects in GWAS.
So, can I conclude that the genome build of input summary statistics is not important for HDL?