feat: unified Zenodo download — Python public script, request URL support, orchestrator#73
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larsvilhuber wants to merge 14 commits intodevelopmentfrom
Open
feat: unified Zenodo download — Python public script, request URL support, orchestrator#73larsvilhuber wants to merge 14 commits intodevelopmentfrom
larsvilhuber wants to merge 14 commits intodevelopmentfrom
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…eration Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…om __file__ Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…nodo scripts Sort metadata CSV rows in save_checksums() (download_zenodo_draft.py) to match the sorted output produced by save_manifests() in download_zenodo_public.py. Both scripts now write filename,bytes rows in sorted path order for reproducibility. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…do downloads Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…L check, use sys.executable - Fix 1: Remove `or identifier` fallback in --print-id so UUID is not used as record_id when resolution fails - Fix 2: Use mod.get_access_token() in record_id_from_request() for .env file support - Fix 3: Tighten gate check to require zenodo.org (or DOI pattern) instead of just 'zenodo' substring - Fix 4: Replace hardcoded python3.12 with sys.executable; use _script_dir() for jira_get_info.py path Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…ines Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
… in commit step Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…script; deprecate shell wrapper
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Summary
tools/download_zenodo_public.py(new): pure-Python replacement fordownload_zenodo_public.sh; accepts record ID, URL, or DOI; generates SHA-256/MD5/metadata manifests ingenerated/matching the draft script's format; deprecated shell wrapper retained for external callerstools/download_zenodo_draft.py(updated): added support for Zenodo community-request URLs (/communities/.../requests/{uuid}); resolves UUID to record ID viaGET /api/requests/{uuid}before downloadingtools/download_zenodo.py(new): orchestrator — parses any Zenodo URL/DOI/ID, routes to the correct downloader, optionally queries Jira for the replication URL when no--zenodo-idis given;--print-idemitszenodo-NNNNfor pipeline shell capturebitbucket-pipelines.yml(updated): both1-populate-from-icpsrandw-big-populate-from-icpsrnow call the orchestrator;ZenodoIDpipeline variable now accepts full URLs, DOIs, or community request URLs in addition to numeric IDs; URL-to-ID resolution added in parallel processing stepstools/download_from_jira_url.py(updated): public Zenodo call switched from bash shell script to Python scriptTest Plan
python3.12 tools/download_zenodo_public.py --dry-run 10848594/records/,/record/, DOI,/deposit/,/communities/.../requests/)--print-idoutputszenodo-NNNNas last line for pipeline capturedownload_zenodo_draft.pyaccepts a community request URL and routes toresolve_request_to_record_id()(requires valid Zenodo token)ZenodoIDto verifyprojectIDis set correctlyZenodoIDto verify URL resolution worksNotes
download_zenodo_draft.pyCI git block still usesos.system()(pre-existing pattern); this is noted as a known issue for a follow-upZENODO_ACCESS_TOKEN; if the token is unavailable during pre-resolution for--print-id, the orchestrator omits the--print-idoutput rather than printing a wrong UUID🤖 Generated with Claude Code