Payer mapping dups 5263#78

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kumc-bmi:payer_mapping_dups_5263

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Commits on Apr 14, 2017

Merge branch 'cycle_2_refresh_2' into med_curate
dckc
committed
Merge pull request #75 from dckc/med_curate
Michael Prittie
authored
oops: fix med id type (#76)
dckc
authored

Commits on Apr 17, 2017

Commits on Apr 19, 2017

Remove rows from PRESCRIBING where all RX_* fields are blank.
Michael Prittie
committed

Commits on Apr 20, 2017

Revert "pcornet_mapping: optimize LOINC mapping"
dckc
committed

Commits on May 9, 2017

Merge pull request #81 from kumc-bmi/cycle_2_refresh_2
Michael Prittie
authored

Commits on May 11, 2017

Removed mapping pieces and drop tables statments from shell/sqlplus script
Michael Prittie
committed

Commits on May 16, 2017

Made PATID and ENCOUNTERID fields numeric for more performant joins.
Michael Prittie
committed

Commits on May 18, 2017

Undoing PATID and ENCOUNTERID field types as this belongs on another branch
Michael Prittie
committed
Seperate transform procedure definition and transform prep into seperate files
Michael Prittie
committed
Updated PCORNetLoader procedure with param used to declare starting point
Michael Prittie
committed
Updated run shell script to reflect changes to PCORNetLoader and PCORNetInit
Michael Prittie
committed
A couple bug fixes
Michael Prittie
committed

Commits on May 23, 2017

Added TRUNCATE TABLE statements to make transform procedures idempotent
Michael Prittie
committed
Added intermediate table for DRGs in ENCOUNTER transform in attempt to improve performance.
Michael Prittie
committed

Commits on May 24, 2017

Fixed two small errors in transform procedures.
Michael Prittie
committed
Fix typo in PCORNetEncounter DRG intermediary table creation
Michael Prittie
committed
Moved creation of intermediary tables to PCORNetInit.sql
Michael Prittie
committed

Commits on May 25, 2017

SQL to create logging table, task sequence, and procedures for manipulation
Michael Prittie
committed
Updated transform to use logging transform.
Michael Prittie
committed
Handful of small fixes
Michael Prittie
committed
Misplaced quote
Michael Prittie
committed

Commits on Jun 1, 2017

Moved post proc tasks into a procedure to better control execution flow.
Michael Prittie
committed

Commits on Jun 6, 2017

Make sure that intermediary transform tables exist before transform is run
Michael Prittie
committed
Replaced drop/create statements with truncate/insert, and updated indexes
Michael Prittie
committed
Removing ontology mapping from this repo and moving to h2p-mapping repo
Michael Prittie
committed
Fixed errors in LogTaskComplete logging calls in PCORNetLoader
Michael Prittie
committed
Merge pull request #83 from kumc-bmi/remove-mapping
Michael Prittie
authored
Merge pull request #84 from kumc-bmi/breakup_sql_4714
Michael Prittie
authored
Removed CSV upload now handled in h2p-mapping
Michael Prittie
committed
Fixed SQL quoting and insert into syntax
Michael Prittie
committed
Removed unclosed parenthesis
Michael Prittie
committed

Commits on Jun 7, 2017

Missed removing one of the old drop table statements
Michael Prittie
committed
Fixed issue with adding index to the wrong table
Michael Prittie
committed
Fixed typo in logging procedure call
Michael Prittie
committed

Commits on Jun 8, 2017

Field additions and updates required by PCORNet CDM v3.1
Michael Prittie
committed
Fixed quoting error and improved indexes
Michael Prittie
committed
Added missing semicolon
Michael Prittie
committed

Commits on Jun 12, 2017

Mislabeled index on procedures
Michael Prittie
committed
Merge pull request #87 from kumc-bmi/logging_4713
Michael Prittie
authored
Update PCORNetLoader procedure to make it more readable and easier to update
Michael Prittie
committed
Added header comments to PCORNetInit.sql
Michael Prittie
committed
Remove unused PCORNetReport
Michael Prittie
committed
Further improvements on PCORNetLoader proc
Michael Prittie
committed
Merged upstream changes
Michael Prittie
committed
Removed uneeded statements
Michael Prittie
committed
Merge branch 'logging_4713' into schema_updates_4745
Michael Prittie
committed
Merge breakup_sql_4714
dckc
authored
Merge logging_4713
dckc
authored
Error in SQL
Michael Prittie
committed
Added accidentally removed PCORNetLoader parameters
Michael Prittie
committed
Using wrong inequality
Michael Prittie
committed

Commits on Jun 20, 2017

Commits on Jun 21, 2017

Re-ordered inner join for better execution plan
Michael Prittie
committed
Corrected table name
Michael Prittie
committed

Commits on Jun 22, 2017

Merge pull request #90 from kumc-bmi/schema_updates_4745
Michael Prittie
authored
Adjust DX_ORIGIN insertion
bconnolly
committed
Determine `dx_type` based on concept code, not icd10 transition date (#4749)
Matt Hoag
committed
Keep the same cardinality for diagnosis facts when converting from i2b2 to pcori.
Matt Hoag
committed

Commits on Jun 26, 2017

Updated field length for v3.1
Michael Prittie
committed
Update field length in accordance with CDM v3.1
Michael Prittie
committed
Merge pull request #93 from kumc-bmi/schema_updates_4745
Michael Prittie
authored

Commits on Jun 27, 2017

Remove bad NDC code if present
Michael Prittie
committed
Merge pull request #94 from kumc-bmi/bad_ndc_v3_1
Michael Prittie
authored
_TIME fields were switched to using 24 hour clock
Michael Prittie
committed
Merge pull request #95 from kumc-bmi/hh24
Michael Prittie
authored
Merge pull request #92 from kumc-bmi/mislabeled_dx_type_4749
Matt Hoag
authored
Merge pull request #91 from bconnolly/dx_origin_insertion_4718
Michael Prittie
authored

Commits on Jun 28, 2017

Hotfix to remove mapping call in update dimensions script
Michael Prittie
committed

Commits on Jul 10, 2017

Fix to exclude LAB_RESULT_CM.RESULT_NUM values which exceed the spec in length
Michael Prittie
committed
Added Observational Stay `OS` to the encounter_type merge.
Matt Hoag
committed
Merge pull request #96 from kumc-bmi/os_encounter_merge_4710
Michael Prittie
authored
In case something is getting rounded up to 10000000
Michael Prittie
committed

Commits on Jul 11, 2017

Added missing parathesis
Michael Prittie
committed
Removed RESULT_NUM field type mapping which was causing an issue with CDM v3.1
Michael Prittie
committed

Commits on Jul 12, 2017

Replace SCILHS lab normal ranges with KUMC normal ranges
Michael Prittie
committed
Merge pull request #97 from kumc-bmi/result_num_fix
Michael Prittie
authored
Merge branch 'master' of github.com:kumc-bmi/i2p-transform into lab_normal_4746
Michael Prittie
committed

Commits on Jul 13, 2017

Break out result of enc_type coalesce before merging to `visit_dimension`
Matt Hoag
committed
Merge pull request #99 from kumc-bmi/speedup_encounter_merge
Michael Prittie
authored
Corrected lab normal range modifier values to align with CDM v3.1 spec
Michael Prittie
committed

Commits on Sep 26, 2017

Fixed normal range modifiers
Michael Prittie
committed
Fixed AGE_UPPER to 100 years in days
Michael Prittie
committed

Commits on Sep 27, 2017

Merge pull request #98 from kumc-bmi/lab_normal_4746
Michael Prittie
authored

Commits on Jan 22, 2018

Commits on Jan 25, 2018

import heron_tasks luigi support
jgaupp
committed

Commits on Jan 29, 2018

Adde Oracle loader and Med_Admin table creation to the Luigi task list.
jgaupp
committed

Commits on Jan 31, 2018

Added additional modifier codes and pcornet_med data to med_admin insert statement
jgaupp
committed

Commits on Feb 15, 2018

Added luigi return codes to configuration
jgaupp
committed

Commits on Feb 19, 2018

Commits on Feb 22, 2018

Increased size of raw name and route fields.
jgaupp
committed

Commits on Mar 1, 2018

Dynamically typed SqlScriptTask dependencies for visualization
jgaupp
committed

Commits on Mar 2, 2018

Luigi CDM full build with table create but not populate
jgaupp
committed

Commits on Mar 5, 2018

Luigi CDM full build with table create and populate
jgaupp
committed

Commits on Mar 6, 2018

Added missing operations to pcornet_init
jgaupp
committed

Commits on Mar 9, 2018

Commits on Mar 28, 2018

Commits on Mar 30, 2018

Commits on Apr 2, 2018

Production version building all tables
jgaupp
committed

Commits on Apr 11, 2018

Commits on Apr 12, 2018

Commits on Apr 13, 2018

Added distinct modifier and comment on death unknown flag.
jgaupp
committed

Commits on Apr 17, 2018

Added post processing procedure to pcornet_loader
jgaupp
committed

Commits on Apr 18, 2018

Set default enrollment months to 42.
jgaupp
committed

Commits on Apr 23, 2018

Change prescribing_transfer to a real table, drop parallel inserts.
jgaupp
committed

Commits on Apr 30, 2018

Optimized prescribing build
jgaupp
committed

Commits on May 10, 2018

Commits on May 14, 2018

Provider relies on provider_dimension rather than clarity@id reads
jgaupp
committed

Commits on May 18, 2018

Commits on May 30, 2018

Commits on Jun 20, 2018

Commits on Jul 2, 2018

Commits on Jul 5, 2018

Commits on Jul 11, 2018

Commits on Jul 12, 2018

Commits on Jul 13, 2018

Adding PRN flag to prescribing.
jgaupp
committed

Commits on Jul 17, 2018

Commits on Jul 18, 2018

Commits on Jul 19, 2018

Commits on Jul 23, 2018

Commits on Jul 24, 2018

Commits on Jul 26, 2018

Minor syntax cleanup of encounter.
jgaupp
committed

Commits on Jul 27, 2018

Commits on Jul 30, 2018

Commits on Aug 1, 2018

Commits on Aug 2, 2018

Commits on Aug 3, 2018

Commits on Oct 10, 2018

Removed duplicated Medicaid OOS
sravanichandakameka
authored