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16 followers · 11 following
  • Alexion Pharmaceuticals
  • Boston, MA

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Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

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@sansterbioanalytics

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Austin-s-h/README.md

Hey! I'm Austin, nice to meet you.

LinkedIn  Twitter  Email   
PhD, Molecular Biology and Genetics (Genetics, Genomics, and Development) from Cornell Unviersity.
Previously a graduate student studying multipotency and differentiation of neural crest cells using cutting-edge genomics from the Simoes-Costa lab at Cornell.

Genomic Analysis Toolkit:

RNA-Seq, scRNA-Seq, Spatial Transcriptomics, ATAC-Seq, scATAC-Seq, ChIP-Seq, CUT&RUN, CUT&TAG, Hi-C/Hi-ChIP, Nanopore Long-read Sequencing, Tomo-Seq, MPRA, AlphaFold, R-Shiny, Plotly, and more!

I code with:

R  Python  Git  Shell Script  Snakemake  Nextflow  Docker  Markdown 

I use:

AWS  Azure  Google Cloud  VS Code  Cloudflare 

I'm learning:

Solidity  TypeScript  Rust  Go  TensorFlow  PyTorch  GitHub Actions 

My Desktop:

Ryzen 5 5600X  GTX 3070  Windows 11  Linux Mint 

DNA Gif - https://tinyurl.com/dmj38yfc
Awesome Badges - https://github.com/Envoy-VC/awesome-badges

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  1. sirnaforge sirnaforge Public

    siRNAforge - Multi-species gene to siRNA design, off-target prediction, and ranking. Comprehensive siRNA design toolkit for gene silencing

    Python 8

  2. copier-astral-nextflow copier-astral-nextflow Public

    Forked from ritwiktiwari/copier-astral

    Fast Modern Nextflow and Python project template with Astral's toolchain (uv, ruff, ty) + pytest, MkDocs, Typer, GitHub Actions, Docker, Nextflow

    Jinja 1

  3. NC_scATAC NC_scATAC Public

    A neural crest single cell ATAC analysis notebook

    HTML 2

  4. NC_Timecourse NC_Timecourse Public

    Updated git with cleaned NC_Timecourse Repo

    R 5 1