Issues

• Dealing with the 2^31 limit in R

  BiocCodingCollaborations/VeniceHackathon2026#17 · Filter by author rafalab opened on Apr 20, 2026
  2

• spatially stratified differential expression

  BiocCodingCollaborations/VeniceHackathon2026#16 · Filter by author patrickjdanaher opened on Apr 19, 2026

• Wrap one or few exemplary foundation models so that they can be applied to a SpatialExperiment ("predict method for FM objects")

  BiocCodingCollaborations/VeniceHackathon2026#15 · Filter by author wolfganghuber opened on Apr 17, 2026

• add ppp object to SpatialExperiment objects

  BiocCodingCollaborations/VeniceHackathon2026#12 · Filter by author mjemons opened on Apr 17, 2026
  2

• automatic classification of cancer vs. normal cells

  BiocCodingCollaborations/VeniceHackathon2026#10 · Filter by author patrickjdanaher opened on Apr 14, 2026

• guidelines for setting up Python environments for use in R/Bioconductor

  BiocCodingCollaborations/VeniceHackathon2026#9 · Filter by author HelenaLC opened on Apr 9, 2026
  1

• per-cell QC biasing analyses

  BiocCodingCollaborations/VeniceHackathon2026#8 · Filter by author patrickjdanaher opened on Apr 9, 2026
  1

• Segmentation quality assessment

  BiocCodingCollaborations/VeniceHackathon2026#7 · Filter by author rafalab opened on Apr 9, 2026
  2

• workflows for big studies

  BiocCodingCollaborations/VeniceHackathon2026#6 · Filter by author patrickjdanaher opened on Apr 9, 2026

• Mapping Spatialdata/scverse to SPE/SFE

  BiocCodingCollaborations/VeniceHackathon2026#5 · Filter by author Artur-man opened on Apr 9, 2026
  5

• Using mlverse/torch on spatial omics, e.g. for applying foundation models

  BiocCodingCollaborations/VeniceHackathon2026#4 · Filter by author Artur-man opened on Apr 9, 2026
  15

• Interoperability between SpatialExperiment and EBImage

  BiocCodingCollaborations/VeniceHackathon2026#2 · Filter by author Bisaloo opened on Mar 20, 2026