Name		Name	Last commit message	Last commit date
docs		docs
singularity		singularity
snakemake		snakemake
.gitignore		.gitignore
00-Introduction.Rmd		00-Introduction.Rmd
01-Setup.Rmd		01-Setup.Rmd
02-Basics.Rmd		02-Basics.Rmd
03-Advanced.Rmd		03-Advanced.Rmd
04-Additional.Rmd		04-Additional.Rmd
05-Singularity.Rmd		05-Singularity.Rmd
NEWS.md		NEWS.md
README.md		README.md
_bookdown.yml		_bookdown.yml
_output.yml		_output.yml
hypothesis.html		hypothesis.html
index.Rmd		index.Rmd
open_review_block.html		open_review_block.html
snakemakeLecture.Rproj		snakemakeLecture.Rproj

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Snakemake & Singularity lecture

Sylvain Schmitt January 4th, 2022

This lecture is adapted from the official Snakemake tutorial. The lecture instructions are given in the online manual.

Have a nice reading,

Sylvain

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Snakemake and Singularity lecture at UMR ECOFOG

sylvainschmitt.github.io/snakemakeLecture/

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