update comet config for singularity 2.3.2

• Added --dontdeletescratch option to createtrainingmrcstack.py to skip
  deletion of scratchdir. Issue #78

• Updated comet configuration to load singularity 2.3.2. Issue #76

update comet config for singularity 2.3.2

• Added --dontdeletescratch option to createtrainingmrcstack.py to skip
  deletion of scratchdir. Issue #78

• Updated comet configuration to load singularity 2.3.2. Issue #76

Fighting the pypi

• Fixed typo in history notes which caused pypi not to render project description properly

Bug fixes for createtrainingmrcstack.py and merge task memory bump

• Fixed bug in createtrainingmrcstack.py which caused program to fail due to incorrect call to get_image_path_list(). Issue #48

• Increased required memory for merge tasks on Rocce cluster from 10 to 20 gigabytes of ram and added virtual_free constraint to handle gigapixel images. Issue #49

Small fixes

• Added --gentifs to createchmjob.py to generate tif probability map images. Issue #43

• Fixed bug in checkchmjob.py --detailed where ram value was incorrect. Issue #44

• Added information about input images to checkchmjob.py --detailed. Issue #28

Small changes

• Added --gentiles flag to createchmimage.py to generate tiles from
  image that can be viewed in probability map viewer. Issue #42

• Added --rawthreshold flag to createprobmapoverlay.py which
  lets caller specify exact pixel intensity value instead of
  percentage as offered with --threshpc. Issue #41

• Added virtual_free to requirements for SGE jobs submitted
  by createchmtrainjob.py to rocce cluster. Issue #40

Added createchmtrainjob.py

• Added --detailed option to checkchmjob.py. Issue #6

• Added --addprobmap to createprobmapoverlay.py to enable
  additional probability maps to be overlayed. Issue #25

• Added createchmtrainjob.py script that creates a CHM
  train job. Issue #19

• Fixed incorrect script names in readme.txt generated by
  createchmjob.py. Issue #20

bug fixes

• Fixed account not being put into runjobs.gordon and runmerge.gordon.
  Issue #11
• Fixed errors in checking job status examples in readme.txt
  created by createchmjob.py. Issue #12

First release

• First release