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  1. tcga-luad-multi-omic-survival-analysis tcga-luad-multi-omic-survival-analysis Public

    Reproducible TCGA-LUAD survival pipeline on RNA-seq, clinical and mutation data. LASSO-Cox gene signature overfit (train C=0.722, test 0.538), reported as a negative finding; clinical Cox model (ag…

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  2. nigellidine-ftsz-computational-drug-discovery nigellidine-ftsz-computational-drug-discovery Public

    Three Nigella sativa alkaloids (indazoles nigellidine, nigellicine; isoquinoline nigellimine) vs S. aureus FtsZ (PDB 3VOA): ADMET screening; docking with Vina, AutoDock4, GNINA, DiffDock-L (redock …

    1

  3. luna16-lung-nodule-classifier luna16-lung-nodule-classifier Public

    In progress (data acquisition); CT lung nodule classifier for the LUNA16 false-positive reduction task (888 scans, 1,186 nodules). Plan: SimpleITK preprocessing, PyRadiomics + gradient-boosting bas…

    1