Make extracting an ontology subtree more flexible#36
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allenbaron wants to merge 5 commits into
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Needed for improvements to is_valid_obo()
- Fix code so it actually works - Add 'parents' method - Condense to single query template file - Make input error message more informative
Now works for both extract_subtree() and extract_subclass()
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Currently, this deprecates
extract_subtree()and replaces it withextract_obo_class(), which provides a more control over class extraction.Still needs testing.
Resolves #7