Homepage: https://snakevir.readthedocs.io/en/latest/
Snakevir is a workflow developed in snakemake that enables viral metagenomic analysis of short-read data. You can give your own parameters/database in the config.yaml file to customize the workflow for your own data.
- Florian CHARRIAT (CIRAD)
- Antoni Exbrayat (CIRAD)
- Etienne Loire (CIRAD)
- Serafin Gutierrez (CIRAD)
Thanks to CulebrONT team’s.
The authors acknowledge the Cirad HPC (South Green Platform) from CIRAD Montpellier for providing HPC resources that contributed to this work. https://bioinfo-agap.cirad.fr/ - http://www.southgreen.fr
Licencied under CeCill-C and GPLv3.
Intellectual property belongs to CIRAD and authors.