Institute of the Human Brain, Interdisciplinary Brain Research department
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- Russian Federation
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- TMFC_denoise Public Forked from Masharipov/TMFC_denoise
TMFC denoise - a new SPM toolbox for task fMRI denoising with user-friendly graphical interface.
IHB-IBR-department/TMFC_denoise’s past year of commit activity - TMFC_toolbox Public Forked from Masharipov/TMFC_toolbox
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
IHB-IBR-department/TMFC_toolbox’s past year of commit activity - ConnInfPy Public
Unified Python framework for permutation-based statistical inference on brain connectivity networks (NBS, TFNBS, cNBS, NI-TFNBS, FBC-TFNBS, GLM, ComBat)
IHB-IBR-department/ConnInfPy’s past year of commit activity - BenchmarkingEOEC Public
Benchmarking 256 resting-state fMRI connectivity pipelines for Eyes Open vs Eyes Closed classification. Compares denoising strategies, atlases, and connectivity metrics across cross-site validation scenarios.
IHB-IBR-department/BenchmarkingEOEC’s past year of commit activity - PIE_toolbox Public
PIE Toolbox is a Python package for processing, analyzing, and classifying neuroimaging voxel data using SSM-PCA and SVM.
IHB-IBR-department/PIE_toolbox’s past year of commit activity - BOLD_deconvolution Public
BOLD signal deconvolution based on ridge regression. Can be used to calculate psycho-physiological interaction (PPI) at the neuronal level. Python and MATLAB functions recover neuronal time series, similar to the Parametric Empirical Bayes (PEB) approach implemented in SPM12 (spm_peb_ppi.m).
IHB-IBR-department/BOLD_deconvolution’s past year of commit activity - TMFC_simulator Public
This package enables users to generate biophysically realistic simulations of task-modulated fMRI time series with predefined task designs and customized synaptic weight matrices for each condition (task or rest).
IHB-IBR-department/TMFC_simulator’s past year of commit activity - TMFC_simulations Public Forked from Masharipov/TMFC_simulations
Repository for Masharipov, R. et al. Comparison of whole-brain task-modulated functional connectivity methods for fMRI task connectomics. Commun Biol 7, 1402 (2024). https://doi.org/10.1038/s42003-024-07088-3
IHB-IBR-department/TMFC_simulations’s past year of commit activity
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