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Scan plotting functions are centralised in plot_functions.py. Each instrument gets a default instance of this on which properties can be set, or alternatively completely overridden. This should allow for different instruments and indeed routines to specify plotting to best represent the data to the scientists.
An example of a customisable item would be data marker size, this can be set by setting default.data_marker_size in the instrument file, or if you want a new plot functions setting it in the constructor.