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Update README.md #1

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zoeschindler Jan 19, 2026
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13 changes: 7 additions & 6 deletions README.md
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Expand Up @@ -42,12 +42,13 @@ You can either:

### Option 1: Set it once per session
```r
galaxy_set_api_key("YOUR_GALAXY_API_KEY")
galaxy_set_credentials("your-secret-key")
```

### Option 2: Add it to `~/.Renviron` (recommended)
```
GALAXY_API_KEY=your-secret-key
#usethis::edit_r_environ()
GALAXY_API_KEY = your-secret-key
```

Restart R after editing `.Renviron`.
Expand Down Expand Up @@ -102,7 +103,7 @@ job_id <- galaxy_run_tool(
text_input = "added text",
infile = list(
src = "hda",
id = file_id$id
id = file_id
),
options = "header" # add text at the top of the file
)
Expand Down Expand Up @@ -178,8 +179,8 @@ Terminal states:

---

Author:
Julian Frey
Chair of Forest Growth and Dendroecology
Author:<br>
Julian Frey<br>
Chair of Forest Growth and Dendroecology<br>
University of Freiburg