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release: 2.11.0 - #668

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DimaMolod merged 1 commit into
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release/2.11.0
Oct 14, 2026
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DimaMolod merged 1 commit into
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release/2.11.0

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  • Version 2.11.0.
  • README synced with AlphaPulldownSnakemake's: the unified-memory formula and
    its two notes name structure_inference_unified_memory_margin_mb, the margin
    the workflow now uses in place of structure_inference_ram_bytes.
  • README: AlphaFold 3 images from 2.11.0 resume by default as well, and the
    example of an AlphaFold 2-only flag is --models_to_relax, since both
    backends now accept --allow_resume.
  • README pins the installer, environment file and image tags to 2.11.0.
  • Copyright headers of AlphaPulldown's own files say 2026; the submodules'
    notices are untouched.

🤖 Generated with Claude Code

- Version 2.11.0.
- README synced with AlphaPulldownSnakemake's: the unified-memory formula and
  its two notes name structure_inference_unified_memory_margin_mb, the margin
  the workflow now uses in place of structure_inference_ram_bytes.
- README: AlphaFold 3 images from 2.11.0 resume by default as well, and the
  example of an AlphaFold 2-only flag is --models_to_relax, since both
  backends now accept --allow_resume.
- README pins the installer, environment file and image tags to 2.11.0.
- Copyright headers of AlphaPulldown's own files say 2026; the submodules'
  notices are untouched.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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@DimaMolod
DimaMolod merged commit 50b508d into main Oct 14, 2026
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