Mm rework lingfeng into Dev - #26

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mm_rework_lingfeng

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Commits on May 14, 2025

add optional print flag for plot_stars_nfilt()
skterry
committed
29506c4

Commits on Jun 3, 2025

parallax handling tweaks
Macy Huston
committed
c40fdea
Merge branch 'motion_model_mjh' of https://github.com/MovingUniverseLab/flystar into motion_model_mjh
Macy Huston
committed
04acd80
add mm input to gaia table
Macy Huston
committed
8d91bf8

Commits on Jun 16, 2025

remove extra prints)
Macy Huston
committed
3139bee
gaia motion model editable by keyword
Macy Huston
committed
82f50fd

Commits on Jun 18, 2025

reference frame shift function
Macy Huston
committed
4b467c8
reference frame shift function
Macy Huston
committed
5e1711d
debug calc_bootstrap_errors for motion model
Macy Huston
committed
0d7cd36

Commits on Jun 20, 2025

debug motion_model_used for MosaicSelfRef
Macy Huston
committed
80a6930

Commits on Jun 26, 2025

check in motion model progress
Macy Huston
committed
d777c61

Commits on Jun 27, 2025

debug matching issue in calc_bootstrap_errors
Macy Huston
committed
c36b716

Commits on Jul 15, 2025

check in debug attempts
Macy Huston
committed
e2176e5

Commits on Jul 17, 2025

dof handling
Macy Huston
committed
a40ad28

Commits on Jul 28, 2025

implementation of motion_model_dict to store motion model metadata
Macy Huston
committed
85f78c4

Commits on Jul 30, 2025

debug motion model rework
Macy Huston
committed
3c3e0ea
improve plx caching
Macy Huston
committed
0c64e5c

Commits on Aug 7, 2025

fit_velocities_all_detected to motion_model first pass
Macy Huston
committed
bc57c60
Added test catalog for testing linear models
wei-lingfeng
committed
f73d9c5
debug:
Macy Huston
committed
37c94e2
Merge branch 'mm_rework' of https://github.com/MovingUniverseLab/flystar into mm_rework
Macy Huston
committed
2871b6c
Fix undefined startable
wei-lingfeng
committed
13a523a
Merge branch 'mm_rework' of https://github.com/MovingUniverseLab/flystar into mm_rework
wei-lingfeng
committed
88e36b0

Commits on Aug 8, 2025

Added test function for fit_velocities_detected_all
wei-lingfeng
committed
c29daaa
motion model import
Macy Huston
committed
bf89b6f
Fix test_fit_velocities_all_detected
wei-lingfeng
committed
b252fbb
Merge branch 'mm_rework' of https://github.com/MovingUniverseLab/flystar into mm_rework
wei-lingfeng
committed
f2699db

Commits on Aug 14, 2025

move fitter options into fit_velocities functions, not motion_model objects
Macy Huston
committed
454e497
move fitter settings for fit_velocities_all_detected test
Macy Huston
committed
dd50d18

Commits on Aug 15, 2025

change motion_model tests for updates
Macy Huston
committed
1bf24d8

Commits on Aug 27, 2025

remove some unecessary fitting
Macy Huston
committed
ed80332

Commits on Aug 28, 2025

Commits on Aug 29, 2025

Add use_scipy, absolute_sigma, and save_path in align.py
wei-lingfeng
committed
0ce4814
Reverting the t0 to be required parameter
wei-lingfeng
committed
c062a35
Removing the all detected requirement for time array
wei-lingfeng
committed
55ca61a
working on merge conflicts
hustonm
committed
88090c7
working on merge conflicts
hustonm
committed
32d16f2
merging
hustonm
committed
1f349e7
fitter keyword debug
Macy Huston
committed
c696977

Commits on Sep 5, 2025

debug weighting keywords
Macy Huston
committed
c8d8186

Commits on Sep 10, 2025

Commits on Sep 13, 2025

debug motion model validation
Macy Huston
committed
bd7ac5e

Commits on Sep 25, 2025

Fix r string import warning
wei-lingfeng
committed
5a859db

Commits on Oct 23, 2025

catch up
Macy Huston
committed
4c85f80

Commits on Oct 24, 2025

decrease memory useage in bootstrap
Macy Huston
committed
010e6b1
debug bootstrap vel
Macy Huston
committed
6e50b6c
debug bootstrap vel
Macy Huston
committed
8d68cbf
finalize bootstrap changes
Macy Huston
committed
b28f8a0
Merge pull request #15 from MovingUniverseLab/bootstrap_memory
hustonm
authored
1f66d3b

Commits on Nov 4, 2025

minor cleanup
Macy Huston
committed
ce82de2
Merge pull request #16 from MovingUniverseLab/bootstrap_memory
hustonm
authored
d74dd8b

Commits on Nov 7, 2025

Commits on Nov 12, 2025

Add get_sigma
wei-lingfeng
committed
443c4bd
Revert back to get_weight
wei-lingfeng
committed
a1ef471

Commits on Nov 13, 2025

Commits on Nov 17, 2025

Add support for motion_model_input
wei-lingfeng
committed
043cdf1

Commits on Nov 18, 2025

attempt to fix plot_stars_nfilt
Macy Huston
committed
82585b4

Commits on Nov 21, 2025

Commits on Nov 22, 2025

update startable_subset() with bootstrap errors
skterry
committed
69af17b

Commits on Nov 25, 2025

MotionModel acceleration with passed testings. Merged get_pos_at_time and get_batch_pos_at_time into model; Replaced MotionModel.fit_motion_model with MotionModel.fit; Rewrote and accelerated StarT…
wei-lingfeng
committed
e0e0c2c

Commits on Dec 4, 2025

Remove unecessary plx functions and add motion model documentation
Macy Huston
committed
2b0bccb
Merge branch 'mm_rework' of https://github.com/MovingUniverseLab/flystar into mm_rework
Macy Huston
committed
a5c988a

Commits on Dec 9, 2025

missing tab fix
Macy Huston
committed
9aa4da7

Commits on Dec 10, 2025

Add Parallax test plot
wei-lingfeng
committed
f932e23

Commits on Dec 15, 2025

Partial Update of align and test_align
wei-lingfeng
committed
be25492

Commits on Dec 16, 2025

Commits on Dec 20, 2025

Midway save of align
wei-lingfeng
committed
a1ff8f3
Add select_stars functionality in fit_motion_model
wei-lingfeng
committed
04fd8ea

Commits on Dec 21, 2025

Passed all tests!
wei-lingfeng
committed
87d7cc4
Merge with upstream mm_rework branch
wei-lingfeng
committed
a685011
Removed old functions; Merged with upstream mm_rework branch
wei-lingfeng
committed
99f678a

Commits on Dec 22, 2025

Added Motion Model Example Notebook; Revert Acceleration Velocity Names
wei-lingfeng
committed
f75a55f

Commits on Jan 8, 2026

calc_bootstrap_errors ref star selection bugfix, plus removing unnecessary loop
Matt Hosek
committed
141be48
reintroducing requirement that ref star actually be matched in epoch
Matt Hosek
committed
a34161d

Commits on Jan 9, 2026

minor debugs and new helper functions
Macy Huston
committed
0663092
Merge branch 'mm_rework' of https://github.com/MovingUniverseLab/flystar into mm_rework
Macy Huston
committed
3e07730
commenting out --doctest-rst which crashes testing
Matt Hosek
committed
4a7e77c
Merge pull request #18 from MovingUniverseLab/mm_rework
mwhosek
authored
5134099

Commits on Jan 12, 2026

plotting fixes for multiple motion models
Macy Huston
committed
5368750
Merge pull request #19 from MovingUniverseLab/bootstrap_fix
hustonm
authored
b238937
debug bootstrap indexing
Macy Huston
committed
91eec87
simplify bug fix
Macy Huston
committed
c8ac551

Commits on Jan 15, 2026

allow bootstrap to optionally update positional errors
Macy Huston
committed
93afbb6
Fix bootstrap index size error
wei-lingfeng
committed
5a049fe

Commits on Jan 22, 2026

Simplify n_params calculation
wei-lingfeng
committed
d87766d

Commits on Jan 23, 2026

Merge branch 'mm_rework_lingfeng' into mm_rework
hustonm
authored
a7af1e1
Merge pull request #20 from wei-lingfeng/mm_rework
hustonm
authored
82448d3

Commits on Jan 26, 2026

Commits on Jan 28, 2026

Add save path for log file
wei-lingfeng
committed
93f4d44

Commits on Jan 30, 2026

Fix mag_lim error in align
wei-lingfeng
committed
9251d9c

Commits on Feb 2, 2026

Commits on Feb 3, 2026

Fix string warning message
wei-lingfeng
committed
dcf8d13

Commits on Feb 8, 2026

Update motion model used for keep_orig stars in align; Update chi2 after ref table has been created in align; Added save path in plots; Moved all testing data files under flystar/test/test_data; Re…
wei-lingfeng
committed
89eaee5

Commits on Feb 9, 2026

Commits on Feb 11, 2026

Midpoint test commit
wei-lingfeng
committed
2a4a611

Commits on Feb 18, 2026

Add motion_model_for_new_star used in add_rows_for_new_stars; Fixed motion_model_used column problem: Now it will only be determined by motion model fit, and the column will be removed if provided …
wei-lingfeng
committed
f979af7

Commits on Feb 26, 2026

Trim trailing spaces
wei-lingfeng
committed
0686a9a

Commits on Mar 19, 2026

Add number of iterations in align output information
wei-lingfeng
committed
3927e66
n_fit now requires unique times as well
wei-lingfeng
committed
6a94841

Commits on Mar 25, 2026

Added seed for test function
wei-lingfeng
committed
f5102b1
Added mag offset to verbose output
wei-lingfeng
committed
ab85b4d
Minor fix of variable names in docstring
wei-lingfeng
committed
aaadaa5
Masking close to 0 values in xe ye in fit motion model to avoid infinite weight
wei-lingfeng
committed
e097536
Revert "Minor fix of variable names in docstring"
wei-lingfeng
committed
c85d2af
Minor fix of variable names in docstring
wei-lingfeng
committed
82462bc

Commits on Mar 30, 2026

Commits on Apr 25, 2026

Commits on Apr 26, 2026

Added verbose control over done with fit message
wei-lingfeng
committed
7012551

Commits on Apr 27, 2026

Revert get all epochs to numpy array; Changed default mask_lists to None instead of False
wei-lingfeng
committed
66dc631
Fix dr calculation in match
wei-lingfeng
committed
0faeb87
Fix xe and ye when not provided
wei-lingfeng
committed
abbf98d

Commits on Apr 29, 2026

Changed plotly scatter to scattergl for faster plotting
wei-lingfeng
committed
594657a

Commits on Apr 30, 2026

Add symbol control in plotly_stars
wei-lingfeng
committed
01f3e7e

Commits on May 1, 2026

Commits on May 22, 2026

Commits on Jun 16, 2026

Commits on Jun 17, 2026

Commits on Jun 18, 2026

Fix duplicate columns; Fix plotting error
wei-lingfeng
committed
a7d1e6b
Revert n_params name and add n_fit_params attribute
wei-lingfeng
committed
d494c23

Commits on Jun 19, 2026

Commits on Jun 23, 2026

Remove extra import
wei-lingfeng
committed
e6f2583
Add missing parameters in determine_motion_model
wei-lingfeng
committed
e76292c

Commits on Jul 2, 2026

Switched back to standard deviation as uncertainties in startables.combine_lists; Added support for artificial star motion model fitting with x/y out (index 1).
wei-lingfeng
committed
d0ae608

Commits on Jul 3, 2026

Change default absolute_sigma=True in align, consistent with motion models
wei-lingfeng
committed
90b2bb6

Commits on Jul 7, 2026

Reverted back to trans_weights and vel_weights
wei-lingfeng
committed
43e285e
Reverted back to snr
wei-lingfeng
committed
22eefd4
Added checking metadata for optional fixed parameters checking
wei-lingfeng
committed
7407bce
Merge branch 'mm_rework_lingfeng' of https://github.com/wei-lingfeng/flystar into mm_rework_lingfeng
wei-lingfeng
committed
aaff539
Updated shift_reference_frame
wei-lingfeng
committed
af80a05
Added keyword check in shift_reference_frame
wei-lingfeng
committed
34227db

Commits on Jul 9, 2026

Commits on Jul 10, 2026

Update adding t0 and n_fit at the end of fit
wei-lingfeng
committed
10280eb
Update xe ye logic when not provided
wei-lingfeng
committed
78bd1a0
Adjusted hover label ordering; Updated docstring
wei-lingfeng
committed
06df7bf

Commits on Jul 29, 2026

Commits on Jul 30, 2026

Commits on Aug 6, 2026

Commits on Aug 7, 2026

Commits on Aug 11, 2026

Commits on Aug 12, 2026

Added support for different mag limits in each iteration in align
wei-lingfeng
committed
278fee3
Save ref table in fits as well
wei-lingfeng
committed
59f4d7c

Commits on Aug 13, 2026

Commits on Aug 14, 2026

Commits on Aug 15, 2026

Commits on Aug 16, 2026

"Claude PR Assistant workflow"
wei-lingfeng
committed
43bc7cb
"Claude Code Review workflow"
wei-lingfeng
committed
ef78316
Merge pull request #1 from wei-lingfeng/add-claude-github-actions-1786841657024
wei-lingfeng
authored
d2cb7f3
Fix NaN propagation bugs exposed by real, invalid-error astrometric data

wei-lingfeng
and
claude
committed
97e2c7e
Add inherit_n_detect: propagate per-star detection counts across align layers

wei-lingfeng
and
claude
committed
14e7f00
Simplify combine_lists' no-usable-weight fallback and fix its silent inf->finite bug

wei-lingfeng
and
claude
committed
eba8435
Add vectorized Linear.run_fit_batch, fixing a stale singular-fit inf->nan bug

wei-lingfeng
and
claude
committed
9a0f8c5
Remove misleading tqdm wrapper from determine_motion_models' model-type loop

wei-lingfeng
and
claude
committed
2d07f94
Avoid vstack's transient double-copy in add_rows_for_new_stars

wei-lingfeng
and
claude
committed
6aa6d38
Fix redundant full-table copying, a stale-param bug, and consolidate weighting

wei-lingfeng
and
claude
committed
9287e51

Commits on Aug 17, 2026

Add configurable KDTree threading and a multiprocessing-overhead threshold to motion-model fitting

wei-lingfeng
and
claude
committed
5485d21
fixed config file

gregorydavidmartinez
authored and
wei-lingfeng
committed
66ac298
Added flystar modules to docs.

gregorydavidmartinez
authored and
wei-lingfeng
committed
7b3fb01
Changed docs formatting a little.

gregorydavidmartinez
authored and
wei-lingfeng
committed
a1b2409
Set up Read the Docs and fix the docs/install build chain

wei-lingfeng
and
claude
committed
5f00827

Commits on Aug 18, 2026