Neoantigen-Pipeline

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CONTENTS OF THIS FILE

• Project title
• Motivation
• Tech/Framework used
• Version of built
• System requirements
• Output
• Credits

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---Project title

Neoantigen prediction pipeline.

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---Motivation

This project was submitted in Cardiff University for MSc Bioinformatics thesis.

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Tech/Framework Used

This project is built with Python.

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Version of built

This project was developed under Python 3.7.7

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System Requirements

• Any Java-enabled platform (Windows, Linux, Mac OS X)
• RAM 1-16Gb

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Dependancies

• Opposum: https://github.com/BSGOxford/OpossumDependancies
• Platypus: https://github.com/andyrimmer/Platypus
• ArcasHLA: https://github.com/RabadanLab/arcasHLA/tree/master/scripts
• NeoPredPipe: https://github.com/MathOnco/NeoPredPipe/blob/master

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Release History