add codonfm 5b arch params

[balvisio]

Description

This PR adds support for the EncodonFM 5B model.

Type of changes

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Refactor
• Documentation update
• Other (please describe):

CI Pipeline Configuration

Configure CI behavior by applying the relevant labels. By default, only basic unit tests are run.

• ciflow:skip - Skip all CI tests for this PR
• ciflow:notebooks - Run Jupyter notebooks execution tests for bionemo2
• ciflow:slow - Run slow single GPU integration tests marked as @pytest.mark.slow for bionemo2
• ciflow:all - Run all tests (unit tests, slow tests, and notebooks) for bionemo2. This label can be used to enforce running tests for all bionemo2.
• ciflow:all-recipes - Run tests for all recipes (under bionemo-recipes). This label can be used to enforce running tests for all recipes.

Unit tests marked as @pytest.mark.multi_gpu or @pytest.mark.distributed are not run in the PR pipeline.

For more details, see CONTRIBUTING

Note

By default, only basic unit tests are run. Add appropriate labels to enable an additional test coverage.

Authorizing CI Runs

We use copy-pr-bot to manage authorization of CI
runs on NVIDIA's compute resources.

• If a pull request is opened by a trusted user and contains only trusted changes, the pull request's code will
  automatically be copied to a pull-request/ prefixed branch in the source repository (e.g. pull-request/123)
• If a pull request is opened by an untrusted user or contains untrusted changes, an NVIDIA org member must leave an
  /ok to test comment on the pull request to trigger CI. This will need to be done for each new commit.

Triggering Code Rabbit AI Review

To trigger a code review from code rabbit, comment on a pull request with one of these commands:

• @coderabbitai review - Triggers a standard review
• @coderabbitai full review - Triggers a comprehensive review

See https://docs.coderabbit.ai/reference/review-commands for a full list of commands.

Pre-submit Checklist

• I have tested these changes locally
• I have updated the documentation accordingly
• I have added/updated tests as needed
• All existing tests pass successfully

[coderabbitai]

Important

Review skipped

Auto reviews are disabled on this repository. Please check the settings in the CodeRabbit UI or the .coderabbit.yaml file in this repository. To trigger a single review, invoke the @coderabbitai review command.

You can disable this status message by setting the reviews.review_status to false in the CodeRabbit configuration file.

Use the checkbox below for a quick retry:

• 🔍 Trigger review

✨ Finishing Touches

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Post copyable unit tests in a comment
• Commit unit tests in branch dev/ba/BIO-233-validate-condonfm-5b-recipe

---

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

• X
• Mastodon
• Reddit
• LinkedIn

_{Comment @coderabbitai help to get the list of available commands and usage tips.}

[trvachov]

approved, pending 1 comment.

[copy-pr-bot]

This pull request requires additional validation before any workflows can run on NVIDIA's runners.

Pull request vetters can view their responsibilities here.

Contributors can view more details about this message here.