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Bioconductor failure and risk of deprecation

Status: Open.

#62 In Nanostring-Biostats/SpatialDecon;

· lshep opened on Feb 3, 2026

t() incompatibility with sparseMatrix

Status: Open.

#60 In Nanostring-Biostats/SpatialDecon;

· mgrout81 opened on Jul 9, 2024

About safeTME

Status: Open.

#57 In Nanostring-Biostats/SpatialDecon;

· ydai3 opened on Nov 1, 2023

Error in running runspatialdecon

Status: Open.

#56 In Nanostring-Biostats/SpatialDecon;

· ydai3 opened on Sep 20, 2023

Gene expression within each cell type

Status: Open.

#55 In Nanostring-Biostats/SpatialDecon;

· manjumoorthy95 opened on Jun 21, 2023

How to generate a UMAP/tSNE from reverseDecon object

Status: Open.

#53 In Nanostring-Biostats/SpatialDecon;

· PietropaoliLab opened on May 10, 2023

How to enable multicore processing and verbosity

Status: Open.

#52 In Nanostring-Biostats/SpatialDecon;

· borexino opened on May 10, 2023

geometric mean of Negprobes

Status: Open.

#51 In Nanostring-Biostats/SpatialDecon;

· RM83 opened on May 8, 2023

Overlay Florets with Spatial Images

Status: Open.

#48 In Nanostring-Biostats/SpatialDecon;

· scSeqLiubice opened on Mar 28, 2023

Error when running spatialdecon() on COSMx data

Status: Open.

#43 In Nanostring-Biostats/SpatialDecon;

· hcurley opened on Oct 10, 2022

Error: NaNs produced, Unsuccessful Convergence

Status: Open.

#42 In Nanostring-Biostats/SpatialDecon;

· Goralsth opened on Sep 14, 2022

Norm matrix from raw matrix and NegProbes

Status: Open.

#41 In Nanostring-Biostats/SpatialDecon;

· cnk113 opened on Aug 25, 2022