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Error in readSpatialOverlay - fluor[['Color']] subscript out of bounds

Status: Open.

#62 In Nanostring-Biostats/SpatialOmicsOverlay;

· MSteketee opened on May 19, 2026

Error for readSpatialOverlay() - Error in .jcall

Status: Open.

#59 In Nanostring-Biostats/SpatialOmicsOverlay;

· ybaeus opened on Aug 2, 2024

LabWorksheet not imported correctly when all mask IDs are number-like strings.

Status: Open.

#57 In Nanostring-Biostats/SpatialOmicsOverlay;

· mgrout81 opened on Oct 30, 2023

fluorLegend not working when fluor targets aren't unique

Status: Open.

#51 In Nanostring-Biostats/SpatialOmicsOverlay;

· mgrout81 opened on Sep 25, 2023

Errors for unexpected annot file inputs

enhancementNew feature or requestNew feature or request

Status: Open.

#46 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Apr 10, 2023

Error: nrow(AOIattrs) < nrow(annots)

Status: Open.

#45 In Nanostring-Biostats/SpatialOmicsOverlay;

· MrModenait opened on Apr 10, 2023

Export OME-TIFF file format

enhancementNew feature or requestNew feature or request

Status: Open.

#38 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Oct 21, 2022

SpatialFeatureExperiment integration

enhancementNew feature or requestNew feature or request

Status: Open.

#35 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Sep 8, 2022

labworksheet read in

Status: Open.

#34 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Aug 4, 2022

Update custom fluor name

v2Feature for next releaseFeature for next release

Status: Open.

#32 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Jul 28, 2022

Allow image to have 1-3 channels

v2Feature for next releaseFeature for next release

Status: Open.

#31 In Nanostring-Biostats/SpatialOmicsOverlay;

· maddygriz opened on Jul 28, 2022

readSpatialOverlay-Error in .jcal

Status: Open.

#30 In Nanostring-Biostats/SpatialOmicsOverlay;

· MusculusMus opened on Jul 2, 2022