Bibliography ingestion (BibTeX/DOI) + verify CLI#2
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- engine/parsing.py: stdlib-only, brace-balanced BibTeX parser + DOI-list parser -> Reference objects (title, authors via 'A and B', year, doi, url, venue). - engine/cli.py: `python3 -m engine.cli refs.bib | dois.txt | --doi X` prints a per-reference verdict table + summary + needs-attention list; --json for machine output. Exit code 1 on any not_found/retracted -> usable as a CI / pre-commit gate on a manuscript's .bib. - 13 new offline tests (parser + CLI with injected verifier). Live-smoked against real APIs: verified / retracted (Wakefield) / not_found (fabricated DOI). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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Builds on the v1 engine: make Matilde usable on a real bibliography, standalone.
What's new
engine/parsing.py— stdlib-only BibTeX parser (brace-balanced; handles{value}/"value"/bareword fields andA and B and Cauthors) + a DOI-list parser →References.engine/cli.py—python3 -m engine.cli refs.bib | dois.txt | --doi X. Per-reference verdict table + summary + needs-attention list;--jsonfor machine output. Exit code 1 on anynot_found/retracted→ drop-in CI / pre-commit gate on a manuscript's.bib.Proven working (live)
Tests
13 new offline tests (parser + CLI via injected verifier). 64 offline total, green. Sanitization gate clean.
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