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feat: Phase G G7 — result-quality flag propagation into calibration engine - #772

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cschanhniem merged 1 commit into
mainfrom
loop85-phase-g7
Jul 9, 2026
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cschanhniem merged 1 commit into
mainfrom
loop85-phase-g7

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Adds assess_result_quality() and filter_results_for_calibration() to gate lab results before they enter the calibration pipeline. Eight quality flags (contamination, assay_interference, replicate_disagreement, etc.). Excluded tier for contamination/interference, low tier for 2+ flags, acceptable tier for 1 flag, high tier for clean results. CLI (openamp-foundry result-quality-filter). Schema (schemas/result_quality_report.schema.json). make result-quality-filter target. 27 tests. 3022 total. Prevents garbage results from driving calibration updates.

@cschanhniem
cschanhniem merged commit 0cc486e into main Jul 9, 2026
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