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This repository is for the code used to create and maintain the Internet Rat Server (IRS) Streamlit application, intended as a user-friendly view for information from the Palmer Lab's database.

To launch:

The main method of running this app is through an AWS ECS Service streamlit as a Fargate instance, created from a Docker image stored in AWS ECR. To run the app locally, use the command:

streamlit run home.py

Tools

Authentication is done through AWS Cognito. The application is deployed with AWS Elastic Container Service.

This application was developed as a project for the Palmer Lab with Streamlit.

Local Files

A database connection, the latest set of HS rats genotypes, and founder genotypes are required to enable full functionality.

Related Resources

ratgenes.org

RatGTEx

The IRS logo is a derivative work from the logo for the Center for Genetics, Genomics, and Epigenetics of Substance Use Disorders in Outbred Rats.

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A Streamlit application for viewing database summaries.

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