Implement Bernstein's breakdown for the perturbed potential energy - #213

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parkjk wants to merge 53 commits into

Commits on Jun 20, 2025

A new branch for snu students to incorporate local developments into the develop branch.
Jong-Kyu Park
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c1a7cd8

Commits on Jul 20, 2026

Merge branch 'develop' into snu_offshoot
jaesun57
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Remove nametag file from documentation
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985c69e
GPEC - WIP - add curvature, shear, K value calculation for recon_flag
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GPEC - WIP - add docs for reconsturction
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GPEC - WIP - modify shear calculation and add some C value calculation logic
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GPEC - docs - Add variable naming convention and mathematical symbols section to documentation
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GPEC- WIP - fix curvature calcuation and make allocation process align with convention
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GPEC - FEATURE - Update core calculations
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GPEC - FEATURE - Add Python analysis and plotting tools
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GPEC - MINOR - Update example configurations and documentation
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GPEC - WIP - Update recon coordinate derivation
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GPEC - FEATURE - Add recon energy diagnostics
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GPEC - MINOR - Document recon input settings
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GPEC - MINOR - Update external perturbation flags in gpec.in
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GPEC - FEATURE - Add configurable recon integration method
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GPEC - MINOR - Document recon integration option in input
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GPEC - MINOR - Fix recon ep summary for selected mode
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GPEC - MINOR - Remove recon completion banner
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GPEC - MINOR - Align recon ep summary labels
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GPEC - MINOR - Document C verify identity in reconstruction note
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GPEC - FEATURE - Add optional C verify diagnostics for recon
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GPEC - MINOR - Document cveri_flag in input
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GPEC - MINOR - Refine C verify output wording
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GPEC - MINOR - Refine recon summary formatting
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GPEC - MINOR - Add recon output control and reuse C verify state
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GPEC - MINOR - Document recon_out input control
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GPEC - RECON2 - 2026-05-22 add recon_flag2 entrypoint
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GPEC - RECON2 - 2026-05-25 add first-form energy kernel
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GPEC - RECON2 - 2026-05-25 add first-form recon output
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GPEC - RECON2 - add template input flag
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GPEC - WIP add recon xi input flags
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DOCS - Remove DIIID ideal example Python scripts from repo
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GPEC - RECON3 - add |C|^2 Bernstein decomposition diagnostic

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GPEC - RECON1 - add per-(psi,theta) terms R-Z output

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DOCS - recon: C effective-field figure + Eulerian/Lagrangian derivation

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DOCS - recon: fix H4 appendix A.2 (|V|^2 residual =, block labeling)

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DOCS - recon: frame V as the rotated edge current + triple-product rule

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GPEC - recon: covariant bare-Q (qvmn) output + fix QvsC figure

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GPEC - recon: remove unused xi injection input flags (xi_flag, xifile)

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Merge origin/develop into recon
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INSTALL - MINOR - regenerate install/DEPENDENCIES.inc

actions-user
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192f758
GPEC - recon: review fixes for gpeq/gpout recon routines

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GPEC - recon: document recon_flag3 in the reference input

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DOCS - recon: document recon_out/recon_int/cveri_flag in main.tex

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FEATURE - Add sol_num parameter to match routine. Adding sol_num parameter and set the wanted number of solution component then this will make Solution{sol_num}.bin file containing the {sol_num}th …
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FEATURE - Add sol_num parameter to match input file. This change initializes sol_num to 1, allowing for better control of solution components.
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Clarify comment for sol_num in match.in regarding DCON eigen function index
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MATCH - recon: unify sol_num index wording (1 = most unstable)

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MATCH - recon: validate sol_num/mripple, drop debug print

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2c03f04

Commits on Jul 21, 2026

GPEC - recon: factor psi-local C-state setup into gpeq_prep_c

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94547e9

Commits on Jul 27, 2026

GPEC - recon: keep p1/q scratch local to recon kernels

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MATCH - MINOR - Header comment reflects sol_num selection

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