LR-Modeling

Sorry the code is a little hackey. Didn't upload out the output files because they're too large. The notebooks do help generate the output files so everything can be remade.

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
190416_PQE1_ODESolver_Attempt_1- Replication of Ke and Perelson Paper .ipynb		190416_PQE1_ODESolver_Attempt_1- Replication of Ke and Perelson Paper .ipynb
190416_PQE1_ODESolver_Attempt_2-Modification of Ke and Perelson with Virions.ipynb		190416_PQE1_ODESolver_Attempt_2-Modification of Ke and Perelson with Virions.ipynb
190416_PQE1_ODESolver_Attempt_3-Modification of Ke and Perelson with Drug Decay.ipynb		190416_PQE1_ODESolver_Attempt_3-Modification of Ke and Perelson with Drug Decay.ipynb
190417_ODE_Modeling of Drug Decay.ipynb		190417_ODE_Modeling of Drug Decay.ipynb
190417_PQE1_ODESolver_Attempt_4-Modification of Ke and Perelson with Real Concentrations.ipynb		190417_PQE1_ODESolver_Attempt_4-Modification of Ke and Perelson with Real Concentrations.ipynb
190417_PQE1_ODESolver_Attempt_5-Modification of Ke and Perelson with Two types of cells.ipynb		190417_PQE1_ODESolver_Attempt_5-Modification of Ke and Perelson with Two types of cells.ipynb
190417_PQE1_ODESolver_Attempt_6-Modification of Ke and Perelson with Two types of cells_parameters from Reeves et al..ipynb		190417_PQE1_ODESolver_Attempt_6-Modification of Ke and Perelson with Two types of cells_parameters from Reeves et al..ipynb
190423_PQE1_Population Heterogeneity.ipynb		190423_PQE1_Population Heterogeneity.ipynb
190425_PQE1_Population Heterogeneity_Testing_Antiproliferative Stratgies.ipynb		190425_PQE1_Population Heterogeneity_Testing_Antiproliferative Stratgies.ipynb
190425_PQE1_Population Heterogeneity_Testing_LRA-Copy1.ipynb		190425_PQE1_Population Heterogeneity_Testing_LRA-Copy1.ipynb
190425_PQE1_Population Heterogeneity_Testing_LRA.ipynb		190425_PQE1_Population Heterogeneity_Testing_LRA.ipynb
190430_PQE1_Sensitivity_Analysis_D_LRA.ipynb		190430_PQE1_Sensitivity_Analysis_D_LRA.ipynb
190430_PQE1_Sensitivity_Analysis_Function_Broken.ipynb		190430_PQE1_Sensitivity_Analysis_Function_Broken.ipynb
190430_PQE1_Sensitivity_Analysis_LRA.ipynb		190430_PQE1_Sensitivity_Analysis_LRA.ipynb
190430_PQE1_Sensitivity_Analysis_W.ipynb		190430_PQE1_Sensitivity_Analysis_W.ipynb
190430_PQE1_Sensitivity_Analysis_d.ipynb		190430_PQE1_Sensitivity_Analysis_d.ipynb
190430_PQE1_Sensitivity_Analysis_d_ALL.ipynb		190430_PQE1_Sensitivity_Analysis_d_ALL.ipynb
190501_Testing_Heterogenous_Pop.ipynb		190501_Testing_Heterogenous_Pop.ipynb
190503_Testing_Heterogenous_LHS_Sampling_D_LRA_keeping_TN_Constant.ipynb		190503_Testing_Heterogenous_LHS_Sampling_D_LRA_keeping_TN_Constant.ipynb
190503_Testing_new.ipynb		190503_Testing_new.ipynb
190505_PQE1_Sensitivity_Analysis_D_LRA_LOW_TN.ipynb		190505_PQE1_Sensitivity_Analysis_D_LRA_LOW_TN.ipynb
190505_PQE1_Sensitivity_Analysis_D_LRA_REG_TN.ipynb		190505_PQE1_Sensitivity_Analysis_D_LRA_REG_TN.ipynb
190507_Figure_1.ipynb		190507_Figure_1.ipynb
190507_adjust_pop_MAKESURETODOFORALL.ipynb		190507_adjust_pop_MAKESURETODOFORALL.ipynb
190509_TN_POP_Therapies.ipynb		190509_TN_POP_Therapies.ipynb
README.md		README.md

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