Update with changes form original fork#12
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Co-authored-by: hoel <public.hoelzlwimmer@tum.de>
* security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) * changed mondo_id_Mapping from get to post * fixed comorbiditome api --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de>
* add reviewed_proteins param to graph builder * integrate reviewed_proteins param to pagnated ppi query --------- Co-authored-by: hoel <public.hoelzlwimmer@tum.de>
* Small fixes and improvements (#4) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * changed mondo_id_Mapping from get to post * fixed comorbiditome api --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * PPI route update (#7) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * changed mondo_id_Mapping from get to post * fixed comorbiditome api * Small fixes and improvements (#4) (#5) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) * changed mondo_id_Mapping from get to post * fixed comorbiditome api --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * Add reviewed_proteins param to pagnated ppi query (#6) * add reviewed_proteins param to graph builder * integrate reviewed_proteins param to pagnated ppi query --------- Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * added ppi route condition for all proteins * trying to make output deterministic and sorted * reverting bool to string conversion * fixing filtered_protein set issue * trying to fix reviewed filter issue * converted to propper post request --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de>
* Small fixes and improvements (#4) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * changed mondo_id_Mapping from get to post * fixed comorbiditome api --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * PPI route update (#7) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * changed mondo_id_Mapping from get to post * fixed comorbiditome api * Small fixes and improvements (#4) (#5) * security update for dependencies * testing removal of / base in addition ot api.base * fixed dependency sceurity issue of requests * add reviewed_proteins param to graph builder (#3) * changed mondo_id_Mapping from get to post * fixed comorbiditome api --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * Add reviewed_proteins param to pagnated ppi query (#6) * add reviewed_proteins param to graph builder * integrate reviewed_proteins param to pagnated ppi query --------- Co-authored-by: hoel <public.hoelzlwimmer@tum.de> * added ppi route condition for all proteins * trying to make output deterministic and sorted * reverting bool to string conversion * fixing filtered_protein set issue * trying to fix reviewed filter issue * converted to propper post request --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de> --------- Co-authored-by: ahoewi <112104849+ahoewi@users.noreply.github.com> Co-authored-by: hoel <public.hoelzlwimmer@tum.de>
Merge hamburg
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