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Generates a single webpage rendering all module views from all given antiSMASH results. The webpage reuses slightly tweaked antiSMASH javascript and CSS to replicate antiSMASH's visualisation.

Installation

Make sure python3 is available.

Clone the repository somewhere accessible (or download the archive and extract it).

Use

The script takes two arguments:

  • an input directory, which should contain subdirectories with antiSMASH results (or at least regions.js and the results JSON)
  • an output directory, which doesn't need to exist, but any existing files will be overwritten

<path you copied to>/gather_modules.py input_dir output_dir

Output

There will now be an index.html in the given output directory, which looks like the following: image

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A NRPS/PKS aggregator for module visualisation from multiple antiSMASH results

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