ATAC focused process#39

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akjohnson wants to merge 7 commits into

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Commits on Jul 3, 2019

(feature) An ATAC focused aggregation process
Audra Johnson
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Need a non-adapter trimmed version of alignment
Audra Johnson
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Remove unneeded processes from ATAC nextflow
Audra Johnson
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Commits on Jul 9, 2019

intermediate tracking commit to use to compare to new changes
Audra Johnson
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Commits on Jul 11, 2019

(fix) Update ATAC process with latest aggregation process
Audra Johnson
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Commits on Jul 12, 2019

(fix) Add SPOT dup score to aggregate process
Audra Johnson
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Commits on Jul 17, 2019

Add shift bam python process
Audra Johnson
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