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[WIP] Add tests for the cli#2

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jmaupetit wants to merge 20 commits intomasterfrom

Commits on Jul 21, 2016

Add flake8 configuration
Julien Maupetit
committed

Commits on Jul 22, 2016

Add draft tests structure
Julien Maupetit
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Fix typo
Julien Maupetit
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Improve fasta testing
Julien Maupetit
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Add six compatibility library
Julien Maupetit
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Fix urllib.request move
Julien Maupetit
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Fix py2 compat for os.makedirs exist_ok parameter
Julien Maupetit
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Fix makedirs compat and add tests for it
Julien Maupetit
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Refactor cli tests to be more generic
Julien Maupetit
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Add tests for NCBI formats
Julien Maupetit
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Add tests for PDB file formats
Julien Maupetit
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Add tests for kegg file format
Julien Maupetit
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Add test for dssp file format
Julien Maupetit
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Fix clustal execution bug with long input path
Julien Maupetit
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Add test for clustal format
Julien Maupetit
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Fix typos
Julien Maupetit
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Add tests for other alignment formats
Julien Maupetit
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Fix pep8
Julien Maupetit
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Disable cache for tests
Julien Maupetit
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Fix interpro ids url
Julien Maupetit
committed