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Feature/minor edits paper - #577

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kristinawlai wants to merge 5 commits into
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feature/minor_edits_paper
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Feature/minor edits paper#577
kristinawlai wants to merge 5 commits into
mainfrom
feature/minor_edits_paper

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@kristinawlai

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Adding minor edits for manuscript

…over time

Merge branch 'main' into feature/minor_edits_paper

# Conflicts:
#	vignettes/articles/_antibody-response-model.qmd
#	vignettes/methodology.qmd
@codecov

codecov Bot commented Jul 21, 2026

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Codecov Report

❌ Patch coverage is 61.11111% with 7 lines in your changes missing coverage. Please review.
✅ All tests successful. No failed tests found.

Files with missing lines Patch % Lines
R/graph.curve.params.R 25.00% 3 Missing ⚠️
R/sim_pop_data_multi.R 0.00% 3 Missing ⚠️
R/autoplot.seroincidence.by.R 0.00% 1 Missing ⚠️
Files with missing lines Coverage Δ
R/autoplot.sim_results.R 100.00% <100.00%> (ø)
R/f_dev.r 94.11% <ø> (ø)
R/sim_pop_data.R 77.50% <ø> (-10.00%) ⬇️
R/simresp.tinf.R 97.95% <100.00%> (-1.05%) ⬇️
R/strat_ests_barplot.R 100.00% <ø> (ø)
R/strat_ests_scatterplot.R 70.00% <100.00%> (ø)
R/autoplot.seroincidence.by.R 96.15% <0.00%> (-3.85%) ⬇️
R/graph.curve.params.R 97.20% <25.00%> (-0.72%) ⬇️
R/sim_pop_data_multi.R 0.00% <0.00%> (-95.39%) ⬇️

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