Jenner compatibility tests for 2 script(s)#1
Open
lwsinclair wants to merge 1 commit into
Open
Conversation
Adds a jenner-check/ directory with two self-contained bundles derived from CDMv4_SAS_Dataset_Date_Time_Reformat.sas: - t001_cdm_enrollment_reformat: ENROLLMENT datepart/mmddyy10. conversion - t002_cdm_harvest_reformat: HARVEST wide reformat, all 18 REFRESH_*_DATE cols Each ships a small mock CDM table in autoexec.sas (in place of the external pcordata library) plus the captured passing run under expected/. Includes the SAS runner (run_jenner.sh/.bat/.sas) and a README. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Jenneranalytics.com provides an API that runs SAS code, with support for more than 200 SAS procedures. You can also use it with Anthropic Claude Code AI in a collaborative workspace. It's available for Mac on the Apple App Store, and by license for Windows and Linux. The datetime-reformatting DATA steps in this repo run on it unmodified.
This PR adds a
jenner-check/directory with two self-contained bundles drawn fromCDMv4_SAS_Dataset_Date_Time_Reformat.sas:t001_cdm_enrollment_reformat(the ENROLLMENT date conversion) andt002_cdm_harvest_reformat(the wide HARVEST table, all 18REFRESH_*_DATEcolumns). Each ships a small mock CDM table inautoexec.sasin place of thepcordatalibrary, with the captured output underexpected/. Run them from the repo root with./jenner-check/run_jenner.sh --all.I liked how thoroughly the reformat script walks the entire PCORnet CDM v4 model — every table's date and time fields in one pass, with the
*_TIMEcolumns renamed to_*_TIMEand rebuilt so original and parsed values never collide. The HARVEST step is a tidy, exhaustive piece of work.No response expected. Merge it, close it, or leave it. To opt out of future messages like this, reply
no-more-prsin a comment or open an issue titledjenner-check: opt out.Lawrence W. Sinclair
CEO / Jenner Analytics Ltd
jenneranalytics.com
linkedin.com/in/lwsinclair/